Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28881 | 86866;86867;86868 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
N2AB | 27240 | 81943;81944;81945 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
N2A | 26313 | 79162;79163;79164 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
N2B | 19816 | 59671;59672;59673 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
Novex-1 | 19941 | 60046;60047;60048 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
Novex-2 | 20008 | 60247;60248;60249 | chr2:178559491;178559490;178559489 | chr2:179424218;179424217;179424216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 0.351 | N | 0.572 | 0.314 | 0.18274738541 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3418 | ambiguous | 0.4085 | ambiguous | -1.247 | Destabilizing | 0.061 | N | 0.539 | neutral | None | None | None | None | N |
H/C | 0.1271 | likely_benign | 0.1439 | benign | -0.961 | Destabilizing | 0.94 | D | 0.624 | neutral | None | None | None | None | N |
H/D | 0.4412 | ambiguous | 0.4882 | ambiguous | -1.301 | Destabilizing | 0.351 | N | 0.572 | neutral | N | 0.442788964 | None | None | N |
H/E | 0.4099 | ambiguous | 0.4453 | ambiguous | -1.213 | Destabilizing | 0.418 | N | 0.41 | neutral | None | None | None | None | N |
H/F | 0.2022 | likely_benign | 0.236 | benign | -0.311 | Destabilizing | 0.264 | N | 0.553 | neutral | None | None | None | None | N |
H/G | 0.5147 | ambiguous | 0.5786 | pathogenic | -1.55 | Destabilizing | 0.418 | N | 0.565 | neutral | None | None | None | None | N |
H/I | 0.1418 | likely_benign | 0.1796 | benign | -0.407 | Destabilizing | 0.001 | N | 0.555 | neutral | None | None | None | None | N |
H/K | 0.2953 | likely_benign | 0.33 | benign | -1.273 | Destabilizing | 0.418 | N | 0.553 | neutral | None | None | None | None | N |
H/L | 0.0954 | likely_benign | 0.1078 | benign | -0.407 | Destabilizing | None | N | 0.535 | neutral | N | 0.346089137 | None | None | N |
H/M | 0.362 | ambiguous | 0.4366 | ambiguous | -0.609 | Destabilizing | 0.716 | D | 0.618 | neutral | None | None | None | None | N |
H/N | 0.1401 | likely_benign | 0.1629 | benign | -1.323 | Destabilizing | 0.351 | N | 0.489 | neutral | N | 0.403385214 | None | None | N |
H/P | 0.8922 | likely_pathogenic | 0.9177 | pathogenic | -0.67 | Destabilizing | 0.523 | D | 0.629 | neutral | N | 0.481173994 | None | None | N |
H/Q | 0.1885 | likely_benign | 0.2136 | benign | -1.121 | Destabilizing | 0.523 | D | 0.539 | neutral | N | 0.410657903 | None | None | N |
H/R | 0.117 | likely_benign | 0.1219 | benign | -1.309 | Destabilizing | 0.351 | N | 0.509 | neutral | N | 0.37550518 | None | None | N |
H/S | 0.2782 | likely_benign | 0.3348 | benign | -1.457 | Destabilizing | 0.129 | N | 0.493 | neutral | None | None | None | None | N |
H/T | 0.2502 | likely_benign | 0.3034 | benign | -1.28 | Destabilizing | 0.001 | N | 0.45 | neutral | None | None | None | None | N |
H/V | 0.1398 | likely_benign | 0.1744 | benign | -0.67 | Destabilizing | 0.001 | N | 0.552 | neutral | None | None | None | None | N |
H/W | 0.3456 | ambiguous | 0.3905 | ambiguous | -0.128 | Destabilizing | 0.951 | D | 0.607 | neutral | None | None | None | None | N |
H/Y | 0.0814 | likely_benign | 0.0876 | benign | 0.069 | Stabilizing | 0.002 | N | 0.207 | neutral | N | 0.393016292 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.