Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28884 | 86875;86876;86877 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
N2AB | 27243 | 81952;81953;81954 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
N2A | 26316 | 79171;79172;79173 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
N2B | 19819 | 59680;59681;59682 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
Novex-1 | 19944 | 60055;60056;60057 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
Novex-2 | 20011 | 60256;60257;60258 | chr2:178559482;178559481;178559480 | chr2:179424209;179424208;179424207 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs761832458 | -1.915 | 0.994 | N | 0.627 | 0.315 | 0.344710718752 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/E | rs761832458 | -1.915 | 0.994 | N | 0.627 | 0.315 | 0.344710718752 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs761832458 | -1.915 | 0.994 | N | 0.627 | 0.315 | 0.344710718752 | gnomAD-4.0.0 | 1.85921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69532E-06 | 1.09803E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9421 | likely_pathogenic | 0.9291 | pathogenic | -1.366 | Destabilizing | 0.99 | D | 0.544 | neutral | None | None | None | None | N |
K/C | 0.8513 | likely_pathogenic | 0.8454 | pathogenic | -1.381 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -2.28 | Highly Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
K/E | 0.9217 | likely_pathogenic | 0.8849 | pathogenic | -1.945 | Destabilizing | 0.994 | D | 0.627 | neutral | N | 0.473027853 | None | None | N |
K/F | 0.9637 | likely_pathogenic | 0.9542 | pathogenic | -0.716 | Destabilizing | 0.994 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/G | 0.9714 | likely_pathogenic | 0.9666 | pathogenic | -1.847 | Destabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
K/H | 0.7893 | likely_pathogenic | 0.7867 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
K/I | 0.818 | likely_pathogenic | 0.7812 | pathogenic | 0.024 | Stabilizing | 0.015 | N | 0.587 | neutral | N | 0.419605461 | None | None | N |
K/L | 0.7687 | likely_pathogenic | 0.745 | pathogenic | 0.024 | Stabilizing | 0.005 | N | 0.536 | neutral | None | None | None | None | N |
K/M | 0.5605 | ambiguous | 0.502 | ambiguous | -0.402 | Destabilizing | 0.981 | D | 0.62 | neutral | None | None | None | None | N |
K/N | 0.9793 | likely_pathogenic | 0.9736 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.484548742 | None | None | N |
K/P | 0.9989 | likely_pathogenic | 0.9988 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
K/Q | 0.5559 | ambiguous | 0.4916 | ambiguous | -1.509 | Destabilizing | 0.996 | D | 0.623 | neutral | N | 0.495874088 | None | None | N |
K/R | 0.1436 | likely_benign | 0.1413 | benign | -0.727 | Destabilizing | 0.991 | D | 0.614 | neutral | N | 0.411948769 | None | None | N |
K/S | 0.9673 | likely_pathogenic | 0.9601 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
K/T | 0.8686 | likely_pathogenic | 0.8283 | pathogenic | -1.783 | Destabilizing | 0.983 | D | 0.561 | neutral | N | 0.489620119 | None | None | N |
K/V | 0.7743 | likely_pathogenic | 0.7378 | pathogenic | -0.423 | Destabilizing | 0.496 | N | 0.583 | neutral | None | None | None | None | N |
K/W | 0.9504 | likely_pathogenic | 0.9432 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.8693 | likely_pathogenic | 0.8638 | pathogenic | -0.442 | Destabilizing | 0.992 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.