Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28896 | 86911;86912;86913 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
N2AB | 27255 | 81988;81989;81990 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
N2A | 26328 | 79207;79208;79209 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
N2B | 19831 | 59716;59717;59718 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
Novex-1 | 19956 | 60091;60092;60093 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
Novex-2 | 20023 | 60292;60293;60294 | chr2:178559446;178559445;178559444 | chr2:179424173;179424172;179424171 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.999 | N | 0.754 | 0.397 | 0.546000776237 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85874E-06 | 0 | 0 |
T/P | rs778149999 | -0.756 | 0.999 | N | 0.752 | 0.434 | 0.494838880905 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/P | rs778149999 | -0.756 | 0.999 | N | 0.752 | 0.434 | 0.494838880905 | gnomAD-4.0.0 | 6.3658E-06 | None | None | None | None | N | None | 0 | 9.14578E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1283 | likely_benign | 0.1243 | benign | -1.024 | Destabilizing | 0.962 | D | 0.497 | neutral | N | 0.46249502 | None | None | N |
T/C | 0.5132 | ambiguous | 0.5115 | ambiguous | -0.538 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/D | 0.7123 | likely_pathogenic | 0.674 | pathogenic | -0.924 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/E | 0.7306 | likely_pathogenic | 0.6827 | pathogenic | -0.849 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
T/F | 0.6223 | likely_pathogenic | 0.6082 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
T/G | 0.3751 | ambiguous | 0.3542 | ambiguous | -1.37 | Destabilizing | 0.994 | D | 0.606 | neutral | None | None | None | None | N |
T/H | 0.6012 | likely_pathogenic | 0.567 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/I | 0.4719 | ambiguous | 0.4734 | ambiguous | -0.164 | Destabilizing | 0.999 | D | 0.754 | deleterious | N | 0.49833839 | None | None | N |
T/K | 0.6809 | likely_pathogenic | 0.6211 | pathogenic | -0.931 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/L | 0.2692 | likely_benign | 0.2571 | benign | -0.164 | Destabilizing | 0.997 | D | 0.592 | neutral | None | None | None | None | N |
T/M | 0.1634 | likely_benign | 0.1614 | benign | 0.206 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/N | 0.2637 | likely_benign | 0.2492 | benign | -1.139 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | N | 0.447946855 | None | None | N |
T/P | 0.8236 | likely_pathogenic | 0.7725 | pathogenic | -0.417 | Destabilizing | 0.999 | D | 0.752 | deleterious | N | 0.508363383 | None | None | N |
T/Q | 0.5317 | ambiguous | 0.4903 | ambiguous | -1.134 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
T/R | 0.6342 | likely_pathogenic | 0.5603 | ambiguous | -0.852 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
T/S | 0.1335 | likely_benign | 0.1286 | benign | -1.344 | Destabilizing | 0.825 | D | 0.327 | neutral | N | 0.422357764 | None | None | N |
T/V | 0.3209 | likely_benign | 0.3275 | benign | -0.417 | Destabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | N |
T/W | 0.894 | likely_pathogenic | 0.8787 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/Y | 0.7211 | likely_pathogenic | 0.6922 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.