Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28897 | 86914;86915;86916 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
N2AB | 27256 | 81991;81992;81993 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
N2A | 26329 | 79210;79211;79212 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
N2B | 19832 | 59719;59720;59721 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
Novex-1 | 19957 | 60094;60095;60096 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
Novex-2 | 20024 | 60295;60296;60297 | chr2:178559443;178559442;178559441 | chr2:179424170;179424169;179424168 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs1702786623 | None | 0.896 | N | 0.373 | 0.176 | 0.186928172975 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/H | rs1702786623 | None | 0.896 | N | 0.373 | 0.176 | 0.186928172975 | gnomAD-4.0.0 | 6.57056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
N/K | rs756448014 | 0.472 | 0.201 | N | 0.205 | 0.073 | 0.0806252709748 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
N/K | rs756448014 | 0.472 | 0.201 | N | 0.205 | 0.073 | 0.0806252709748 | gnomAD-4.0.0 | 3.42125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49763E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1258 | likely_benign | 0.1391 | benign | -0.475 | Destabilizing | 0.25 | N | 0.279 | neutral | None | None | None | None | N |
N/C | 0.1749 | likely_benign | 0.1963 | benign | 0.454 | Stabilizing | 0.992 | D | 0.34 | neutral | None | None | None | None | N |
N/D | 0.1122 | likely_benign | 0.1149 | benign | -0.623 | Destabilizing | 0.002 | N | 0.103 | neutral | N | 0.384839526 | None | None | N |
N/E | 0.3064 | likely_benign | 0.3254 | benign | -0.639 | Destabilizing | 0.002 | N | 0.121 | neutral | None | None | None | None | N |
N/F | 0.4936 | ambiguous | 0.5273 | ambiguous | -0.767 | Destabilizing | 0.92 | D | 0.353 | neutral | None | None | None | None | N |
N/G | 0.1498 | likely_benign | 0.1615 | benign | -0.686 | Destabilizing | 0.25 | N | 0.265 | neutral | None | None | None | None | N |
N/H | 0.1028 | likely_benign | 0.1065 | benign | -0.783 | Destabilizing | 0.896 | D | 0.373 | neutral | N | 0.457355772 | None | None | N |
N/I | 0.2136 | likely_benign | 0.2374 | benign | 0.01 | Stabilizing | 0.896 | D | 0.384 | neutral | N | 0.456910268 | None | None | N |
N/K | 0.2717 | likely_benign | 0.2864 | benign | 0.003 | Stabilizing | 0.201 | N | 0.205 | neutral | N | 0.430977247 | None | None | N |
N/L | 0.2252 | likely_benign | 0.2441 | benign | 0.01 | Stabilizing | 0.617 | D | 0.357 | neutral | None | None | None | None | N |
N/M | 0.2982 | likely_benign | 0.3267 | benign | 0.705 | Stabilizing | 0.992 | D | 0.295 | neutral | None | None | None | None | N |
N/P | 0.348 | ambiguous | 0.3801 | ambiguous | -0.125 | Destabilizing | 0.92 | D | 0.335 | neutral | None | None | None | None | N |
N/Q | 0.2537 | likely_benign | 0.2716 | benign | -0.6 | Destabilizing | 0.447 | N | 0.296 | neutral | None | None | None | None | N |
N/R | 0.281 | likely_benign | 0.2945 | benign | 0.161 | Stabilizing | 0.617 | D | 0.293 | neutral | None | None | None | None | N |
N/S | 0.0609 | likely_benign | 0.0634 | benign | -0.244 | Destabilizing | 0.007 | N | 0.113 | neutral | N | 0.415450435 | None | None | N |
N/T | 0.0951 | likely_benign | 0.1055 | benign | -0.121 | Destabilizing | 0.201 | N | 0.197 | neutral | N | 0.387013039 | None | None | N |
N/V | 0.1846 | likely_benign | 0.2039 | benign | -0.125 | Destabilizing | 0.617 | D | 0.34 | neutral | None | None | None | None | N |
N/W | 0.6808 | likely_pathogenic | 0.6985 | pathogenic | -0.686 | Destabilizing | 0.992 | D | 0.481 | neutral | None | None | None | None | N |
N/Y | 0.1723 | likely_benign | 0.1786 | benign | -0.428 | Destabilizing | 0.963 | D | 0.319 | neutral | N | 0.471631791 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.