Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28900 | 86923;86924;86925 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
N2AB | 27259 | 82000;82001;82002 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
N2A | 26332 | 79219;79220;79221 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
N2B | 19835 | 59728;59729;59730 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
Novex-1 | 19960 | 60103;60104;60105 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
Novex-2 | 20027 | 60304;60305;60306 | chr2:178559434;178559433;178559432 | chr2:179424161;179424160;179424159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs727504793 | 0.452 | None | N | 0.101 | 0.146 | 0.0884992946249 | gnomAD-4.0.0 | 2.05275E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69857E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1545 | likely_benign | 0.1403 | benign | -0.276 | Destabilizing | 0.007 | N | 0.179 | neutral | None | None | None | None | N |
N/C | 0.1492 | likely_benign | 0.1525 | benign | 0.381 | Stabilizing | 0.676 | D | 0.223 | neutral | None | None | None | None | N |
N/D | 0.1932 | likely_benign | 0.1959 | benign | 0.05 | Stabilizing | 0.012 | N | 0.13 | neutral | N | 0.44938965 | None | None | N |
N/E | 0.3859 | ambiguous | 0.3774 | ambiguous | None | Stabilizing | 0.016 | N | 0.106 | neutral | None | None | None | None | N |
N/F | 0.3437 | ambiguous | 0.3304 | benign | -0.699 | Destabilizing | 0.214 | N | 0.31 | neutral | None | None | None | None | N |
N/G | 0.1735 | likely_benign | 0.1555 | benign | -0.425 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | N |
N/H | 0.0715 | likely_benign | 0.067 | benign | -0.473 | Destabilizing | None | N | 0.095 | neutral | N | 0.433902909 | None | None | N |
N/I | 0.1334 | likely_benign | 0.1353 | benign | 0.027 | Stabilizing | 0.055 | N | 0.362 | neutral | N | 0.485139806 | None | None | N |
N/K | 0.2731 | likely_benign | 0.2805 | benign | 0.07 | Stabilizing | None | N | 0.101 | neutral | N | 0.429766526 | None | None | N |
N/L | 0.1404 | likely_benign | 0.1433 | benign | 0.027 | Stabilizing | 0.031 | N | 0.274 | neutral | None | None | None | None | N |
N/M | 0.2482 | likely_benign | 0.2445 | benign | 0.343 | Stabilizing | 0.628 | D | 0.235 | neutral | None | None | None | None | N |
N/P | 0.1726 | likely_benign | 0.1651 | benign | -0.048 | Destabilizing | None | N | 0.131 | neutral | None | None | None | None | N |
N/Q | 0.2261 | likely_benign | 0.2148 | benign | -0.281 | Destabilizing | 0.072 | N | 0.145 | neutral | None | None | None | None | N |
N/R | 0.2826 | likely_benign | 0.2772 | benign | 0.146 | Stabilizing | 0.016 | N | 0.112 | neutral | None | None | None | None | N |
N/S | 0.0635 | likely_benign | 0.0619 | benign | -0.038 | Destabilizing | None | N | 0.094 | neutral | N | 0.433073403 | None | None | N |
N/T | 0.0912 | likely_benign | 0.0887 | benign | 0.04 | Stabilizing | 0.012 | N | 0.121 | neutral | N | 0.427280794 | None | None | N |
N/V | 0.1478 | likely_benign | 0.15 | benign | -0.048 | Destabilizing | 0.072 | N | 0.3 | neutral | None | None | None | None | N |
N/W | 0.6215 | likely_pathogenic | 0.6022 | pathogenic | -0.727 | Destabilizing | 0.864 | D | 0.233 | neutral | None | None | None | None | N |
N/Y | 0.1145 | likely_benign | 0.1177 | benign | -0.457 | Destabilizing | 0.029 | N | 0.343 | neutral | D | 0.522580687 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.