Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28909 | 86950;86951;86952 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
N2AB | 27268 | 82027;82028;82029 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
N2A | 26341 | 79246;79247;79248 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
N2B | 19844 | 59755;59756;59757 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
Novex-1 | 19969 | 60130;60131;60132 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
Novex-2 | 20036 | 60331;60332;60333 | chr2:178559407;178559406;178559405 | chr2:179424134;179424133;179424132 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.883 | 0.658 | 0.802462509306 | gnomAD-4.0.0 | 6.84255E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87266E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9423 | likely_pathogenic | 0.9534 | pathogenic | -2.764 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/C | 0.8829 | likely_pathogenic | 0.9005 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -2.55 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/E | 0.9964 | likely_pathogenic | 0.9973 | pathogenic | -2.374 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/F | 0.7791 | likely_pathogenic | 0.811 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.650814198 | None | None | N |
L/G | 0.9869 | likely_pathogenic | 0.991 | pathogenic | -3.285 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/H | 0.9905 | likely_pathogenic | 0.9926 | pathogenic | -2.465 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/I | 0.2855 | likely_benign | 0.3303 | benign | -1.282 | Destabilizing | 0.969 | D | 0.852 | deleterious | D | 0.612426668 | None | None | N |
L/K | 0.9943 | likely_pathogenic | 0.9961 | pathogenic | -2.123 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
L/M | 0.3556 | ambiguous | 0.3982 | ambiguous | -1.251 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/N | 0.9939 | likely_pathogenic | 0.9955 | pathogenic | -2.332 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/P | 0.9925 | likely_pathogenic | 0.9943 | pathogenic | -1.753 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/Q | 0.9798 | likely_pathogenic | 0.9848 | pathogenic | -2.295 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/R | 0.9866 | likely_pathogenic | 0.9896 | pathogenic | -1.65 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/S | 0.9893 | likely_pathogenic | 0.992 | pathogenic | -3.155 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.651621415 | None | None | N |
L/T | 0.94 | likely_pathogenic | 0.9536 | pathogenic | -2.822 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/V | 0.3225 | likely_benign | 0.3653 | ambiguous | -1.753 | Destabilizing | 0.521 | D | 0.619 | neutral | D | 0.584909797 | None | None | N |
L/W | 0.9828 | likely_pathogenic | 0.9855 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/Y | 0.9849 | likely_pathogenic | 0.9884 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.