Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28911 | 86956;86957;86958 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
N2AB | 27270 | 82033;82034;82035 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
N2A | 26343 | 79252;79253;79254 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
N2B | 19846 | 59761;59762;59763 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
Novex-1 | 19971 | 60136;60137;60138 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
Novex-2 | 20038 | 60337;60338;60339 | chr2:178559401;178559400;178559399 | chr2:179424128;179424127;179424126 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs370232500 | None | 0.995 | N | 0.649 | 0.509 | 0.423480098753 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02554E-05 |
E/G | None | None | 1.0 | N | 0.603 | 0.518 | 0.504541157375 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86082E-06 | 0 | 0 |
E/K | None | None | 0.997 | N | 0.705 | 0.333 | 0.407082143382 | gnomAD-4.0.0 | 2.40069E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62506E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2779 | likely_benign | 0.3341 | benign | -0.404 | Destabilizing | 0.995 | D | 0.649 | neutral | N | 0.521519107 | None | None | N |
E/C | 0.9621 | likely_pathogenic | 0.9715 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/D | 0.5158 | ambiguous | 0.5409 | ambiguous | -0.422 | Destabilizing | 0.965 | D | 0.607 | neutral | N | 0.487626615 | None | None | N |
E/F | 0.9751 | likely_pathogenic | 0.9827 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
E/G | 0.4954 | ambiguous | 0.5588 | ambiguous | -0.615 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.479486314 | None | None | N |
E/H | 0.9036 | likely_pathogenic | 0.9354 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/I | 0.7035 | likely_pathogenic | 0.7642 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/K | 0.5042 | ambiguous | 0.5946 | pathogenic | 0.25 | Stabilizing | 0.997 | D | 0.705 | prob.neutral | N | 0.513286413 | None | None | N |
E/L | 0.8287 | likely_pathogenic | 0.8611 | pathogenic | 0.118 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/M | 0.7931 | likely_pathogenic | 0.8478 | pathogenic | 0.221 | Stabilizing | 0.998 | D | 0.604 | neutral | None | None | None | None | N |
E/N | 0.7269 | likely_pathogenic | 0.7806 | pathogenic | -0.057 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/P | 0.6444 | likely_pathogenic | 0.6775 | pathogenic | -0.035 | Destabilizing | 0.992 | D | 0.609 | neutral | None | None | None | None | N |
E/Q | 0.3275 | likely_benign | 0.411 | ambiguous | -0.027 | Destabilizing | 0.999 | D | 0.674 | neutral | N | 0.516961436 | None | None | N |
E/R | 0.7021 | likely_pathogenic | 0.771 | pathogenic | 0.455 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/S | 0.5447 | ambiguous | 0.621 | pathogenic | -0.229 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/T | 0.5738 | likely_pathogenic | 0.6689 | pathogenic | -0.06 | Destabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | N |
E/V | 0.4839 | ambiguous | 0.55 | ambiguous | -0.035 | Destabilizing | 0.998 | D | 0.608 | neutral | N | 0.479232824 | None | None | N |
E/W | 0.9928 | likely_pathogenic | 0.9951 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/Y | 0.9508 | likely_pathogenic | 0.965 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.