Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28913 | 86962;86963;86964 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
N2AB | 27272 | 82039;82040;82041 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
N2A | 26345 | 79258;79259;79260 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
N2B | 19848 | 59767;59768;59769 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
Novex-1 | 19973 | 60142;60143;60144 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
Novex-2 | 20040 | 60343;60344;60345 | chr2:178559395;178559394;178559393 | chr2:179424122;179424121;179424120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs2154157801 | None | 0.523 | N | 0.591 | 0.26 | 0.452834868696 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3377 | likely_benign | 0.3762 | ambiguous | -0.786 | Destabilizing | 0.983 | D | 0.533 | neutral | None | None | None | None | N |
A/D | 0.437 | ambiguous | 0.4745 | ambiguous | -1.666 | Destabilizing | 0.101 | N | 0.5 | neutral | N | 0.483195579 | None | None | N |
A/E | 0.4474 | ambiguous | 0.4814 | ambiguous | -1.589 | Destabilizing | 0.001 | N | 0.231 | neutral | None | None | None | None | N |
A/F | 0.3761 | ambiguous | 0.402 | ambiguous | -0.84 | Destabilizing | 0.94 | D | 0.603 | neutral | None | None | None | None | N |
A/G | 0.1141 | likely_benign | 0.1204 | benign | -1.35 | Destabilizing | None | N | 0.085 | neutral | N | 0.411719483 | None | None | N |
A/H | 0.5434 | ambiguous | 0.5856 | pathogenic | -1.659 | Destabilizing | 0.836 | D | 0.561 | neutral | None | None | None | None | N |
A/I | 0.2802 | likely_benign | 0.2967 | benign | -0.09 | Destabilizing | 0.836 | D | 0.603 | neutral | None | None | None | None | N |
A/K | 0.6688 | likely_pathogenic | 0.7036 | pathogenic | -1.249 | Destabilizing | 0.264 | N | 0.495 | neutral | None | None | None | None | N |
A/L | 0.2248 | likely_benign | 0.2409 | benign | -0.09 | Destabilizing | 0.418 | N | 0.524 | neutral | None | None | None | None | N |
A/M | 0.2123 | likely_benign | 0.2296 | benign | -0.061 | Destabilizing | 0.983 | D | 0.553 | neutral | None | None | None | None | N |
A/N | 0.2425 | likely_benign | 0.2785 | benign | -1.17 | Destabilizing | 0.418 | N | 0.535 | neutral | None | None | None | None | N |
A/P | 0.8841 | likely_pathogenic | 0.8839 | pathogenic | -0.345 | Destabilizing | 0.523 | D | 0.591 | neutral | N | 0.47347238 | None | None | N |
A/Q | 0.419 | ambiguous | 0.4562 | ambiguous | -1.181 | Destabilizing | 0.264 | N | 0.575 | neutral | None | None | None | None | N |
A/R | 0.6123 | likely_pathogenic | 0.6471 | pathogenic | -1.057 | Destabilizing | 0.418 | N | 0.581 | neutral | None | None | None | None | N |
A/S | 0.0873 | likely_benign | 0.0919 | benign | -1.553 | Destabilizing | 0.021 | N | 0.097 | neutral | N | 0.426243431 | None | None | N |
A/T | 0.0915 | likely_benign | 0.0946 | benign | -1.375 | Destabilizing | 0.213 | N | 0.4 | neutral | N | 0.400416693 | None | None | N |
A/V | 0.1472 | likely_benign | 0.1554 | benign | -0.345 | Destabilizing | 0.351 | N | 0.463 | neutral | N | 0.431419965 | None | None | N |
A/W | 0.8145 | likely_pathogenic | 0.8353 | pathogenic | -1.43 | Destabilizing | 0.983 | D | 0.577 | neutral | None | None | None | None | N |
A/Y | 0.5204 | ambiguous | 0.5672 | pathogenic | -0.921 | Destabilizing | 0.94 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.