Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28919 | 86980;86981;86982 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
N2AB | 27278 | 82057;82058;82059 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
N2A | 26351 | 79276;79277;79278 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
N2B | 19854 | 59785;59786;59787 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
Novex-1 | 19979 | 60160;60161;60162 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
Novex-2 | 20046 | 60361;60362;60363 | chr2:178559377;178559376;178559375 | chr2:179424104;179424103;179424102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.18 | N | 0.31 | 0.175 | 0.430808444494 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8549 | likely_pathogenic | 0.8794 | pathogenic | -2.422 | Highly Destabilizing | 0.994 | D | 0.648 | neutral | D | 0.546225244 | None | None | N |
V/C | 0.9482 | likely_pathogenic | 0.9598 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -3.421 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.615553787 | None | None | N |
V/E | 0.9962 | likely_pathogenic | 0.9967 | pathogenic | -3.102 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/F | 0.8358 | likely_pathogenic | 0.8543 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.817 | deleterious | D | 0.557746134 | None | None | N |
V/G | 0.9487 | likely_pathogenic | 0.9593 | pathogenic | -3.018 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.615553787 | None | None | N |
V/H | 0.998 | likely_pathogenic | 0.9985 | pathogenic | -2.895 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.0857 | likely_benign | 0.0885 | benign | -0.675 | Destabilizing | 0.18 | N | 0.31 | neutral | N | 0.492178501 | None | None | N |
V/K | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -1.964 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/L | 0.5897 | likely_pathogenic | 0.6222 | pathogenic | -0.675 | Destabilizing | 0.849 | D | 0.595 | neutral | N | 0.512708851 | None | None | N |
V/M | 0.7063 | likely_pathogenic | 0.7347 | pathogenic | -0.962 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
V/N | 0.994 | likely_pathogenic | 0.9954 | pathogenic | -2.644 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/P | 0.9971 | likely_pathogenic | 0.9976 | pathogenic | -1.241 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/Q | 0.9941 | likely_pathogenic | 0.9951 | pathogenic | -2.291 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/R | 0.9933 | likely_pathogenic | 0.9939 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/S | 0.9722 | likely_pathogenic | 0.979 | pathogenic | -3.134 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.9252 | likely_pathogenic | 0.9394 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/W | 0.998 | likely_pathogenic | 0.9983 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/Y | 0.9871 | likely_pathogenic | 0.9898 | pathogenic | -1.623 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.