Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28921 | 86986;86987;86988 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
N2AB | 27280 | 82063;82064;82065 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
N2A | 26353 | 79282;79283;79284 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
N2B | 19856 | 59791;59792;59793 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
Novex-1 | 19981 | 60166;60167;60168 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
Novex-2 | 20048 | 60367;60368;60369 | chr2:178559371;178559370;178559369 | chr2:179424098;179424097;179424096 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.45 | N | 0.542 | 0.174 | 0.110078149338 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0887 | likely_benign | 0.089 | benign | -1.223 | Destabilizing | 0.45 | N | 0.542 | neutral | N | 0.30617002 | None | None | N |
G/C | 0.4413 | ambiguous | 0.4858 | ambiguous | -1.733 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/D | 0.9895 | likely_pathogenic | 0.9905 | pathogenic | -2.828 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
G/E | 0.9862 | likely_pathogenic | 0.9879 | pathogenic | -2.65 | Highly Destabilizing | 0.997 | D | 0.825 | deleterious | N | 0.467659028 | None | None | N |
G/F | 0.9882 | likely_pathogenic | 0.9903 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
G/H | 0.993 | likely_pathogenic | 0.9932 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
G/I | 0.8827 | likely_pathogenic | 0.9116 | pathogenic | -0.341 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
G/K | 0.9962 | likely_pathogenic | 0.9965 | pathogenic | -1.219 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
G/L | 0.9046 | likely_pathogenic | 0.9154 | pathogenic | -0.341 | Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
G/M | 0.9453 | likely_pathogenic | 0.9517 | pathogenic | -0.942 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/N | 0.9788 | likely_pathogenic | 0.9815 | pathogenic | -1.693 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
G/P | 0.8705 | likely_pathogenic | 0.8993 | pathogenic | -0.605 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
G/Q | 0.9844 | likely_pathogenic | 0.985 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
G/R | 0.9832 | likely_pathogenic | 0.9845 | pathogenic | -1.312 | Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.467912518 | None | None | N |
G/S | 0.2792 | likely_benign | 0.2764 | benign | -1.888 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
G/T | 0.6655 | likely_pathogenic | 0.6888 | pathogenic | -1.625 | Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
G/V | 0.6809 | likely_pathogenic | 0.7362 | pathogenic | -0.605 | Destabilizing | 0.995 | D | 0.848 | deleterious | N | 0.489830763 | None | None | N |
G/W | 0.9877 | likely_pathogenic | 0.9891 | pathogenic | -1.108 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/Y | 0.9886 | likely_pathogenic | 0.9906 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.