Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28927 | 87004;87005;87006 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
N2AB | 27286 | 82081;82082;82083 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
N2A | 26359 | 79300;79301;79302 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
N2B | 19862 | 59809;59810;59811 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
Novex-1 | 19987 | 60184;60185;60186 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
Novex-2 | 20054 | 60385;60386;60387 | chr2:178559353;178559352;178559351 | chr2:179424080;179424079;179424078 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.197 | 0.056 | 0.139678290688 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93752E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.105 | likely_benign | 0.1146 | benign | -0.928 | Destabilizing | 0.052 | N | 0.481 | neutral | N | 0.449042933 | None | None | N |
V/C | 0.572 | likely_pathogenic | 0.6067 | pathogenic | -0.794 | Destabilizing | 0.935 | D | 0.576 | neutral | None | None | None | None | N |
V/D | 0.36 | ambiguous | 0.4195 | ambiguous | -0.931 | Destabilizing | 0.484 | N | 0.635 | neutral | N | 0.486657172 | None | None | N |
V/E | 0.2642 | likely_benign | 0.2996 | benign | -1.038 | Destabilizing | 0.38 | N | 0.629 | neutral | None | None | None | None | N |
V/F | 0.158 | likely_benign | 0.163 | benign | -1.222 | Destabilizing | 0.317 | N | 0.602 | neutral | N | 0.518788233 | None | None | N |
V/G | 0.1989 | likely_benign | 0.2208 | benign | -1.087 | Destabilizing | 0.117 | N | 0.619 | neutral | N | 0.50670437 | None | None | N |
V/H | 0.4913 | ambiguous | 0.53 | ambiguous | -0.596 | Destabilizing | 0.935 | D | 0.636 | neutral | None | None | None | None | N |
V/I | 0.062 | likely_benign | 0.0605 | benign | -0.641 | Destabilizing | None | N | 0.197 | neutral | N | 0.415277076 | None | None | N |
V/K | 0.2989 | likely_benign | 0.3096 | benign | -0.563 | Destabilizing | 0.38 | N | 0.629 | neutral | None | None | None | None | N |
V/L | 0.1356 | likely_benign | 0.1371 | benign | -0.641 | Destabilizing | 0.009 | N | 0.407 | neutral | N | 0.449773652 | None | None | N |
V/M | 0.1089 | likely_benign | 0.1033 | benign | -0.392 | Destabilizing | 0.38 | N | 0.593 | neutral | None | None | None | None | N |
V/N | 0.2404 | likely_benign | 0.2747 | benign | -0.332 | Destabilizing | 0.555 | D | 0.648 | neutral | None | None | None | None | N |
V/P | 0.2892 | likely_benign | 0.3138 | benign | -0.702 | Destabilizing | 0.001 | N | 0.469 | neutral | None | None | None | None | N |
V/Q | 0.2838 | likely_benign | 0.2993 | benign | -0.686 | Destabilizing | 0.555 | D | 0.648 | neutral | None | None | None | None | N |
V/R | 0.2607 | likely_benign | 0.2759 | benign | 0.04 | Stabilizing | 0.555 | D | 0.646 | neutral | None | None | None | None | N |
V/S | 0.1681 | likely_benign | 0.1879 | benign | -0.724 | Destabilizing | 0.081 | N | 0.618 | neutral | None | None | None | None | N |
V/T | 0.1075 | likely_benign | 0.1098 | benign | -0.737 | Destabilizing | 0.002 | N | 0.313 | neutral | None | None | None | None | N |
V/W | 0.6812 | likely_pathogenic | 0.7022 | pathogenic | -1.248 | Destabilizing | 0.935 | D | 0.673 | neutral | None | None | None | None | N |
V/Y | 0.4665 | ambiguous | 0.5001 | ambiguous | -0.928 | Destabilizing | 0.555 | D | 0.592 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.