Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28929 | 87010;87011;87012 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
N2AB | 27288 | 82087;82088;82089 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
N2A | 26361 | 79306;79307;79308 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
N2B | 19864 | 59815;59816;59817 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
Novex-1 | 19989 | 60190;60191;60192 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
Novex-2 | 20056 | 60391;60392;60393 | chr2:178559347;178559346;178559345 | chr2:179424074;179424073;179424072 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs778373815 | None | 0.014 | N | 0.413 | 0.06 | 0.216624796971 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
I/V | None | None | None | N | 0.108 | 0.054 | 0.132336055621 | gnomAD-4.0.0 | 1.32036E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44376E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1344 | likely_benign | 0.1487 | benign | -1.018 | Destabilizing | None | N | 0.156 | neutral | None | None | None | None | N |
I/C | 0.3561 | ambiguous | 0.3799 | ambiguous | -0.759 | Destabilizing | 0.245 | N | 0.37 | neutral | None | None | None | None | N |
I/D | 0.2787 | likely_benign | 0.2892 | benign | -0.242 | Destabilizing | 0.009 | N | 0.455 | neutral | None | None | None | None | N |
I/E | 0.2066 | likely_benign | 0.2228 | benign | -0.315 | Destabilizing | None | N | 0.259 | neutral | None | None | None | None | N |
I/F | 0.1015 | likely_benign | 0.1054 | benign | -0.892 | Destabilizing | 0.022 | N | 0.263 | neutral | None | None | None | None | N |
I/G | 0.2784 | likely_benign | 0.3226 | benign | -1.224 | Destabilizing | 0.009 | N | 0.376 | neutral | None | None | None | None | N |
I/H | 0.245 | likely_benign | 0.2607 | benign | -0.431 | Destabilizing | 0.497 | N | 0.439 | neutral | None | None | None | None | N |
I/K | 0.181 | likely_benign | 0.1971 | benign | -0.474 | Destabilizing | 0.014 | N | 0.413 | neutral | N | 0.337562867 | None | None | N |
I/L | 0.0635 | likely_benign | 0.0707 | benign | -0.582 | Destabilizing | None | N | 0.095 | neutral | N | 0.336696075 | None | None | N |
I/M | 0.0692 | likely_benign | 0.0695 | benign | -0.485 | Destabilizing | 0.033 | N | 0.35 | neutral | N | 0.397515248 | None | None | N |
I/N | 0.1 | likely_benign | 0.1131 | benign | -0.259 | Destabilizing | 0.085 | N | 0.525 | neutral | None | None | None | None | N |
I/P | 0.3245 | likely_benign | 0.3697 | ambiguous | -0.693 | Destabilizing | 0.085 | N | 0.486 | neutral | None | None | None | None | N |
I/Q | 0.1626 | likely_benign | 0.1793 | benign | -0.512 | Destabilizing | 0.044 | N | 0.497 | neutral | None | None | None | None | N |
I/R | 0.1678 | likely_benign | 0.177 | benign | 0.109 | Stabilizing | 0.033 | N | 0.488 | neutral | N | 0.367365699 | None | None | N |
I/S | 0.1115 | likely_benign | 0.1288 | benign | -0.819 | Destabilizing | 0.009 | N | 0.363 | neutral | None | None | None | None | N |
I/T | 0.1061 | likely_benign | 0.1148 | benign | -0.782 | Destabilizing | 0.007 | N | 0.349 | neutral | N | 0.359380934 | None | None | N |
I/V | 0.0559 | likely_benign | 0.0553 | benign | -0.693 | Destabilizing | None | N | 0.108 | neutral | N | 0.319707825 | None | None | N |
I/W | 0.5725 | likely_pathogenic | 0.5924 | pathogenic | -0.856 | Destabilizing | 0.788 | D | 0.426 | neutral | None | None | None | None | N |
I/Y | 0.2742 | likely_benign | 0.3025 | benign | -0.618 | Destabilizing | 0.085 | N | 0.442 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.