Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28932 | 87019;87020;87021 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
N2AB | 27291 | 82096;82097;82098 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
N2A | 26364 | 79315;79316;79317 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
N2B | 19867 | 59824;59825;59826 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
Novex-1 | 19992 | 60199;60200;60201 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
Novex-2 | 20059 | 60400;60401;60402 | chr2:178559338;178559337;178559336 | chr2:179424065;179424064;179424063 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1702752207 | None | 0.613 | N | 0.761 | 0.277 | 0.387042434762 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3298 | likely_benign | 0.3122 | benign | -0.699 | Destabilizing | 0.613 | D | 0.761 | deleterious | N | 0.475137312 | None | None | N |
E/C | 0.9271 | likely_pathogenic | 0.9189 | pathogenic | -0.398 | Destabilizing | 0.994 | D | 0.813 | deleterious | None | None | None | None | N |
E/D | 0.2362 | likely_benign | 0.2504 | benign | -0.984 | Destabilizing | 0.001 | N | 0.321 | neutral | N | 0.463869912 | None | None | N |
E/F | 0.8827 | likely_pathogenic | 0.8574 | pathogenic | 0.224 | Stabilizing | 0.997 | D | 0.849 | deleterious | None | None | None | None | N |
E/G | 0.4649 | ambiguous | 0.4655 | ambiguous | -1.106 | Destabilizing | 0.949 | D | 0.787 | deleterious | N | 0.488775023 | None | None | N |
E/H | 0.779 | likely_pathogenic | 0.7529 | pathogenic | 0.066 | Stabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
E/I | 0.5091 | ambiguous | 0.4884 | ambiguous | 0.427 | Stabilizing | 0.928 | D | 0.82 | deleterious | None | None | None | None | N |
E/K | 0.4421 | ambiguous | 0.4286 | ambiguous | -0.434 | Destabilizing | 0.746 | D | 0.745 | deleterious | N | 0.475581839 | None | None | N |
E/L | 0.6188 | likely_pathogenic | 0.6033 | pathogenic | 0.427 | Stabilizing | 0.928 | D | 0.758 | deleterious | None | None | None | None | N |
E/M | 0.6323 | likely_pathogenic | 0.5936 | pathogenic | 0.778 | Stabilizing | 0.964 | D | 0.847 | deleterious | None | None | None | None | N |
E/N | 0.5295 | ambiguous | 0.5251 | ambiguous | -1.076 | Destabilizing | 0.598 | D | 0.803 | deleterious | None | None | None | None | N |
E/P | 0.8614 | likely_pathogenic | 0.8796 | pathogenic | 0.073 | Stabilizing | 0.658 | D | 0.779 | deleterious | None | None | None | None | N |
E/Q | 0.2928 | likely_benign | 0.2861 | benign | -0.897 | Destabilizing | 0.88 | D | 0.787 | deleterious | N | 0.470163789 | None | None | N |
E/R | 0.6438 | likely_pathogenic | 0.6365 | pathogenic | -0.053 | Destabilizing | 0.965 | D | 0.787 | deleterious | None | None | None | None | N |
E/S | 0.4143 | ambiguous | 0.4073 | ambiguous | -1.419 | Destabilizing | 0.512 | D | 0.751 | deleterious | None | None | None | None | N |
E/T | 0.4165 | ambiguous | 0.3888 | ambiguous | -1.067 | Destabilizing | 0.911 | D | 0.751 | deleterious | None | None | None | None | N |
E/V | 0.3187 | likely_benign | 0.2916 | benign | 0.073 | Stabilizing | 0.874 | D | 0.773 | deleterious | N | 0.465555433 | None | None | N |
E/W | 0.9721 | likely_pathogenic | 0.9684 | pathogenic | 0.566 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
E/Y | 0.8384 | likely_pathogenic | 0.8244 | pathogenic | 0.52 | Stabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.