Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28934 | 87025;87026;87027 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
N2AB | 27293 | 82102;82103;82104 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
N2A | 26366 | 79321;79322;79323 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
N2B | 19869 | 59830;59831;59832 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
Novex-1 | 19994 | 60205;60206;60207 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
Novex-2 | 20061 | 60406;60407;60408 | chr2:178559332;178559331;178559330 | chr2:179424059;179424058;179424057 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1280845808 | 0.15 | 0.986 | N | 0.705 | 0.188 | 0.143124449307 | gnomAD-2.1.1 | 4.24E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.67E-05 | None | 0 | 0 | 0 |
K/N | rs1280845808 | 0.15 | 0.986 | N | 0.705 | 0.188 | 0.143124449307 | gnomAD-4.0.0 | 1.38871E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.42266E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1903 | likely_benign | 0.1976 | benign | -0.013 | Destabilizing | 0.963 | D | 0.532 | neutral | None | None | None | None | N |
K/C | 0.5659 | likely_pathogenic | 0.5678 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
K/D | 0.403 | ambiguous | 0.3896 | ambiguous | -0.374 | Destabilizing | 0.989 | D | 0.639 | neutral | None | None | None | None | N |
K/E | 0.1252 | likely_benign | 0.1151 | benign | -0.394 | Destabilizing | 0.908 | D | 0.517 | neutral | N | 0.460563862 | None | None | N |
K/F | 0.6965 | likely_pathogenic | 0.6861 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
K/G | 0.2452 | likely_benign | 0.2378 | benign | -0.119 | Destabilizing | 0.989 | D | 0.491 | neutral | None | None | None | None | N |
K/H | 0.303 | likely_benign | 0.2997 | benign | -0.179 | Destabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/I | 0.3033 | likely_benign | 0.2976 | benign | 0.184 | Stabilizing | 0.995 | D | 0.731 | deleterious | None | None | None | None | N |
K/L | 0.2561 | likely_benign | 0.263 | benign | 0.184 | Stabilizing | 0.989 | D | 0.491 | neutral | None | None | None | None | N |
K/M | 0.2035 | likely_benign | 0.2022 | benign | -0.168 | Destabilizing | 0.998 | D | 0.663 | prob.neutral | N | 0.474439296 | None | None | N |
K/N | 0.3235 | likely_benign | 0.3199 | benign | -0.051 | Destabilizing | 0.986 | D | 0.705 | prob.delet. | N | 0.514686348 | None | None | N |
K/P | 0.3146 | likely_benign | 0.3312 | benign | 0.14 | Stabilizing | 0.995 | D | 0.708 | prob.delet. | None | None | None | None | N |
K/Q | 0.1151 | likely_benign | 0.1137 | benign | -0.198 | Destabilizing | 0.379 | N | 0.327 | neutral | N | 0.474185806 | None | None | N |
K/R | 0.0768 | likely_benign | 0.0735 | benign | -0.155 | Destabilizing | 0.908 | D | 0.521 | neutral | N | 0.484710158 | None | None | N |
K/S | 0.2475 | likely_benign | 0.2532 | benign | -0.396 | Destabilizing | 0.963 | D | 0.583 | neutral | None | None | None | None | N |
K/T | 0.1209 | likely_benign | 0.1238 | benign | -0.312 | Destabilizing | 0.986 | D | 0.656 | prob.neutral | N | 0.42235219 | None | None | N |
K/V | 0.2358 | likely_benign | 0.2333 | benign | 0.14 | Stabilizing | 0.989 | D | 0.627 | neutral | None | None | None | None | N |
K/W | 0.6654 | likely_pathogenic | 0.6527 | pathogenic | -0.492 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/Y | 0.5986 | likely_pathogenic | 0.5818 | pathogenic | -0.147 | Destabilizing | 0.998 | D | 0.663 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.