Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28938 | 87037;87038;87039 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
N2AB | 27297 | 82114;82115;82116 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
N2A | 26370 | 79333;79334;79335 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
N2B | 19873 | 59842;59843;59844 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
Novex-1 | 19998 | 60217;60218;60219 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
Novex-2 | 20065 | 60418;60419;60420 | chr2:178559320;178559319;178559318 | chr2:179424047;179424046;179424045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs770082146 | 0.043 | 0.999 | N | 0.72 | 0.25 | 0.197625483188 | gnomAD-2.1.1 | 4.27E-06 | None | None | None | None | N | None | 0 | 3.18E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs770082146 | 0.043 | 0.999 | N | 0.72 | 0.25 | 0.197625483188 | gnomAD-4.0.0 | 3.31181E-06 | None | None | None | None | N | None | 0 | 4.98753E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.185 | N | 0.419 | 0.079 | 0.197625483188 | gnomAD-4.0.0 | 1.2004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31258E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7026 | likely_pathogenic | 0.7564 | pathogenic | -0.257 | Destabilizing | 0.998 | D | 0.657 | prob.neutral | None | None | None | None | N |
K/C | 0.7865 | likely_pathogenic | 0.8329 | pathogenic | -0.52 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
K/D | 0.9519 | likely_pathogenic | 0.965 | pathogenic | 0.339 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
K/E | 0.6116 | likely_pathogenic | 0.6602 | pathogenic | 0.403 | Stabilizing | 0.981 | D | 0.661 | prob.neutral | N | 0.470729539 | None | None | N |
K/F | 0.8948 | likely_pathogenic | 0.9163 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/G | 0.8762 | likely_pathogenic | 0.9016 | pathogenic | -0.533 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
K/H | 0.5264 | ambiguous | 0.5865 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/I | 0.5066 | ambiguous | 0.5382 | ambiguous | 0.416 | Stabilizing | 0.991 | D | 0.779 | deleterious | N | 0.463310026 | None | None | N |
K/L | 0.4831 | ambiguous | 0.521 | ambiguous | 0.416 | Stabilizing | 0.979 | D | 0.563 | neutral | None | None | None | None | N |
K/M | 0.3635 | ambiguous | 0.3963 | ambiguous | 0.118 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
K/N | 0.8295 | likely_pathogenic | 0.8716 | pathogenic | -0.115 | Destabilizing | 0.999 | D | 0.72 | deleterious | N | 0.497481075 | None | None | N |
K/P | 0.8825 | likely_pathogenic | 0.8951 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/Q | 0.267 | likely_benign | 0.3002 | benign | -0.207 | Destabilizing | 0.986 | D | 0.745 | deleterious | N | 0.470983029 | None | None | N |
K/R | 0.0944 | likely_benign | 0.0978 | benign | -0.203 | Destabilizing | 0.185 | N | 0.419 | neutral | N | 0.489923977 | None | None | N |
K/S | 0.825 | likely_pathogenic | 0.8653 | pathogenic | -0.75 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/T | 0.4111 | ambiguous | 0.462 | ambiguous | -0.502 | Destabilizing | 0.997 | D | 0.673 | prob.neutral | N | 0.457624265 | None | None | N |
K/V | 0.4785 | ambiguous | 0.5115 | ambiguous | 0.222 | Stabilizing | 0.984 | D | 0.726 | deleterious | None | None | None | None | N |
K/W | 0.8586 | likely_pathogenic | 0.8902 | pathogenic | -0.138 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/Y | 0.8061 | likely_pathogenic | 0.848 | pathogenic | 0.185 | Stabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.