Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28941 | 87046;87047;87048 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
N2AB | 27300 | 82123;82124;82125 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
N2A | 26373 | 79342;79343;79344 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
N2B | 19876 | 59851;59852;59853 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
Novex-1 | 20001 | 60226;60227;60228 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
Novex-2 | 20068 | 60427;60428;60429 | chr2:178559311;178558637;178558636 | chr2:179424038;179423364;179423363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1702394454 | None | 0.946 | N | 0.512 | None | 0.385743280973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1702394454 | None | 0.946 | N | 0.512 | None | 0.385743280973 | gnomAD-4.0.0 | 2.57384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79203E-06 | 0 | 0 |
E/K | None | None | 0.996 | N | 0.646 | 0.355 | 0.440915056915 | gnomAD-4.0.0 | 1.67668E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.99442E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4071 | ambiguous | 0.4043 | ambiguous | -0.283 | Destabilizing | 0.993 | D | 0.7 | prob.delet. | N | 0.463346025 | None | None | N |
E/C | 0.962 | likely_pathogenic | 0.9629 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.4912 | ambiguous | 0.4627 | ambiguous | -0.347 | Destabilizing | 0.946 | D | 0.512 | neutral | N | 0.45671548 | None | None | N |
E/F | 0.9836 | likely_pathogenic | 0.984 | pathogenic | -0.211 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/G | 0.3825 | ambiguous | 0.3812 | ambiguous | -0.459 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.463817005 | None | None | N |
E/H | 0.9118 | likely_pathogenic | 0.9094 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/I | 0.9057 | likely_pathogenic | 0.9055 | pathogenic | 0.138 | Stabilizing | 0.998 | D | 0.722 | deleterious | None | None | None | None | N |
E/K | 0.5195 | ambiguous | 0.5415 | ambiguous | 0.401 | Stabilizing | 0.996 | D | 0.646 | neutral | N | 0.488557532 | None | None | N |
E/L | 0.8777 | likely_pathogenic | 0.8779 | pathogenic | 0.138 | Stabilizing | 0.998 | D | 0.659 | prob.neutral | None | None | None | None | N |
E/M | 0.8232 | likely_pathogenic | 0.8161 | pathogenic | 0.146 | Stabilizing | 0.997 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.7408 | likely_pathogenic | 0.7199 | pathogenic | 0.07 | Stabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
E/P | 0.9928 | likely_pathogenic | 0.9929 | pathogenic | 0.018 | Stabilizing | 0.988 | D | 0.747 | deleterious | None | None | None | None | N |
E/Q | 0.215 | likely_benign | 0.2235 | benign | 0.098 | Stabilizing | 0.998 | D | 0.612 | neutral | N | 0.513571627 | None | None | N |
E/R | 0.6698 | likely_pathogenic | 0.6808 | pathogenic | 0.598 | Stabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
E/S | 0.5084 | ambiguous | 0.4974 | ambiguous | -0.065 | Destabilizing | 0.994 | D | 0.701 | prob.delet. | None | None | None | None | N |
E/T | 0.6718 | likely_pathogenic | 0.6625 | pathogenic | 0.081 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
E/V | 0.6948 | likely_pathogenic | 0.6971 | pathogenic | 0.018 | Stabilizing | 0.997 | D | 0.673 | prob.neutral | N | 0.497520755 | None | None | N |
E/W | 0.9931 | likely_pathogenic | 0.9937 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/Y | 0.9674 | likely_pathogenic | 0.967 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.734 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.