Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28948 | 87067;87068;87069 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
N2AB | 27307 | 82144;82145;82146 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
N2A | 26380 | 79363;79364;79365 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
N2B | 19883 | 59872;59873;59874 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
Novex-1 | 20008 | 60247;60248;60249 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
Novex-2 | 20075 | 60448;60449;60450 | chr2:178558617;178558616;178558615 | chr2:179423344;179423343;179423342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs768882533 | -0.234 | 0.986 | N | 0.663 | 0.21 | 0.193865811164 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.37E-05 | None | 0 | 0 | 0 |
K/N | rs768882533 | -0.234 | 0.986 | N | 0.663 | 0.21 | 0.193865811164 | gnomAD-4.0.0 | 1.59592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4486E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6127 | likely_pathogenic | 0.5133 | ambiguous | -0.036 | Destabilizing | 0.963 | D | 0.585 | neutral | None | None | None | None | I |
K/C | 0.7992 | likely_pathogenic | 0.7576 | pathogenic | -0.328 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
K/D | 0.7107 | likely_pathogenic | 0.6379 | pathogenic | 0.092 | Stabilizing | 0.995 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/E | 0.4394 | ambiguous | 0.3603 | ambiguous | 0.112 | Stabilizing | 0.854 | D | 0.535 | neutral | N | 0.480211202 | None | None | I |
K/F | 0.8744 | likely_pathogenic | 0.832 | pathogenic | -0.174 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/G | 0.6386 | likely_pathogenic | 0.5571 | ambiguous | -0.25 | Destabilizing | 0.989 | D | 0.629 | neutral | None | None | None | None | I |
K/H | 0.3848 | ambiguous | 0.3454 | ambiguous | -0.435 | Destabilizing | 0.997 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/I | 0.6098 | likely_pathogenic | 0.5125 | ambiguous | 0.454 | Stabilizing | 0.802 | D | 0.749 | deleterious | N | 0.471355558 | None | None | I |
K/L | 0.564 | likely_pathogenic | 0.497 | ambiguous | 0.454 | Stabilizing | 0.726 | D | 0.629 | neutral | None | None | None | None | I |
K/M | 0.3961 | ambiguous | 0.3217 | benign | 0.148 | Stabilizing | 0.996 | D | 0.7 | prob.neutral | None | None | None | None | I |
K/N | 0.508 | ambiguous | 0.4445 | ambiguous | 0.098 | Stabilizing | 0.986 | D | 0.663 | neutral | N | 0.410364328 | None | None | I |
K/P | 0.9168 | likely_pathogenic | 0.8902 | pathogenic | 0.319 | Stabilizing | 0.998 | D | 0.738 | prob.delet. | None | None | None | None | I |
K/Q | 0.2127 | likely_benign | 0.1839 | benign | -0.043 | Destabilizing | 0.892 | D | 0.657 | neutral | N | 0.474554666 | None | None | I |
K/R | 0.09 | likely_benign | 0.0875 | benign | -0.069 | Destabilizing | 0.025 | N | 0.269 | neutral | N | 0.436748427 | None | None | I |
K/S | 0.6383 | likely_pathogenic | 0.5469 | ambiguous | -0.406 | Destabilizing | 0.963 | D | 0.614 | neutral | None | None | None | None | I |
K/T | 0.4032 | ambiguous | 0.3126 | benign | -0.23 | Destabilizing | 0.953 | D | 0.682 | prob.neutral | N | 0.473362588 | None | None | I |
K/V | 0.5676 | likely_pathogenic | 0.4658 | ambiguous | 0.319 | Stabilizing | 0.876 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/W | 0.8538 | likely_pathogenic | 0.8213 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
K/Y | 0.6701 | likely_pathogenic | 0.6139 | pathogenic | 0.161 | Stabilizing | 0.963 | D | 0.744 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.