Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28959 | 87100;87101;87102 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
N2AB | 27318 | 82177;82178;82179 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
N2A | 26391 | 79396;79397;79398 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
N2B | 19894 | 59905;59906;59907 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
Novex-1 | 20019 | 60280;60281;60282 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
Novex-2 | 20086 | 60481;60482;60483 | chr2:178558584;178558583;178558582 | chr2:179423311;179423310;179423309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs752544445 | -2.222 | 0.922 | N | 0.605 | 0.299 | 0.507031862817 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
V/A | rs752544445 | -2.222 | 0.922 | N | 0.605 | 0.299 | 0.507031862817 | gnomAD-4.0.0 | 2.0528E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2467 | likely_benign | 0.2547 | benign | -1.899 | Destabilizing | 0.922 | D | 0.605 | neutral | N | 0.492951213 | None | None | N |
V/C | 0.828 | likely_pathogenic | 0.8462 | pathogenic | -1.928 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
V/D | 0.995 | likely_pathogenic | 0.9946 | pathogenic | -1.824 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.5286382 | None | None | N |
V/E | 0.9881 | likely_pathogenic | 0.9874 | pathogenic | -1.533 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/F | 0.6797 | likely_pathogenic | 0.6952 | pathogenic | -1.206 | Destabilizing | 0.987 | D | 0.845 | deleterious | N | 0.507999049 | None | None | N |
V/G | 0.7377 | likely_pathogenic | 0.7441 | pathogenic | -2.487 | Highly Destabilizing | 0.996 | D | 0.87 | deleterious | N | 0.520876292 | None | None | N |
V/H | 0.9942 | likely_pathogenic | 0.9944 | pathogenic | -2.379 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.0902 | likely_benign | 0.0894 | benign | -0.215 | Destabilizing | 0.015 | N | 0.209 | neutral | N | 0.509515389 | None | None | N |
V/K | 0.9912 | likely_pathogenic | 0.9909 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
V/L | 0.3386 | likely_benign | 0.335 | benign | -0.215 | Destabilizing | 0.116 | N | 0.482 | neutral | N | 0.515763784 | None | None | N |
V/M | 0.3911 | ambiguous | 0.3937 | ambiguous | -0.677 | Destabilizing | 0.987 | D | 0.742 | deleterious | None | None | None | None | N |
V/N | 0.9778 | likely_pathogenic | 0.978 | pathogenic | -1.852 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.992 | likely_pathogenic | 0.9911 | pathogenic | -0.754 | Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
V/Q | 0.9806 | likely_pathogenic | 0.9807 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.981 | likely_pathogenic | 0.9803 | pathogenic | -1.602 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/S | 0.7862 | likely_pathogenic | 0.7977 | pathogenic | -2.598 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/T | 0.5901 | likely_pathogenic | 0.6229 | pathogenic | -2.12 | Highly Destabilizing | 0.995 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/W | 0.9961 | likely_pathogenic | 0.9963 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/Y | 0.9723 | likely_pathogenic | 0.9735 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.