Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28970 | 87133;87134;87135 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
N2AB | 27329 | 82210;82211;82212 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
N2A | 26402 | 79429;79430;79431 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
N2B | 19905 | 59938;59939;59940 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
Novex-1 | 20030 | 60313;60314;60315 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
Novex-2 | 20097 | 60514;60515;60516 | chr2:178558551;178558550;178558549 | chr2:179423278;179423277;179423276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1575593866 | None | 1.0 | N | 0.83 | 0.503 | 0.383256108077 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/D | rs1575593866 | None | 1.0 | N | 0.83 | 0.503 | 0.383256108077 | gnomAD-4.0.0 | 7.10465E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.43436E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9322 | likely_pathogenic | 0.933 | pathogenic | -0.276 | Destabilizing | 0.998 | D | 0.621 | neutral | N | 0.512337008 | None | None | I |
G/C | 0.9813 | likely_pathogenic | 0.9804 | pathogenic | -0.607 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.540102501 | None | None | I |
G/D | 0.9953 | likely_pathogenic | 0.9961 | pathogenic | -0.942 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.502030659 | None | None | I |
G/E | 0.9966 | likely_pathogenic | 0.9965 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
G/F | 0.9969 | likely_pathogenic | 0.9968 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
G/H | 0.9964 | likely_pathogenic | 0.9966 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/I | 0.9975 | likely_pathogenic | 0.9976 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
G/K | 0.9953 | likely_pathogenic | 0.9956 | pathogenic | -0.743 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
G/L | 0.9957 | likely_pathogenic | 0.996 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
G/M | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/N | 0.994 | likely_pathogenic | 0.994 | pathogenic | -0.294 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/P | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
G/Q | 0.9946 | likely_pathogenic | 0.9947 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
G/R | 0.981 | likely_pathogenic | 0.9824 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.894 | deleterious | N | 0.489117418 | None | None | I |
G/S | 0.9082 | likely_pathogenic | 0.9052 | pathogenic | -0.353 | Destabilizing | 0.927 | D | 0.646 | neutral | N | 0.51132305 | None | None | I |
G/T | 0.9905 | likely_pathogenic | 0.9905 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
G/V | 0.9948 | likely_pathogenic | 0.9948 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.876 | deleterious | N | 0.507919689 | None | None | I |
G/W | 0.993 | likely_pathogenic | 0.9933 | pathogenic | -1.349 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/Y | 0.9953 | likely_pathogenic | 0.995 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.