Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28973 | 87142;87143;87144 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
N2AB | 27332 | 82219;82220;82221 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
N2A | 26405 | 79438;79439;79440 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
N2B | 19908 | 59947;59948;59949 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
Novex-1 | 20033 | 60322;60323;60324 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
Novex-2 | 20100 | 60523;60524;60525 | chr2:178558542;178558541;178558540 | chr2:179423269;179423268;179423267 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.003 | N | 0.309 | 0.128 | 0.21279746466 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5775 | likely_pathogenic | 0.7087 | pathogenic | 0.044 | Stabilizing | 0.912 | D | 0.619 | neutral | None | None | None | None | I |
R/C | 0.2804 | likely_benign | 0.3784 | ambiguous | -0.181 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
R/D | 0.8502 | likely_pathogenic | 0.9094 | pathogenic | -0.157 | Destabilizing | 0.973 | D | 0.627 | neutral | None | None | None | None | I |
R/E | 0.6241 | likely_pathogenic | 0.7415 | pathogenic | -0.096 | Destabilizing | 0.608 | D | 0.569 | neutral | None | None | None | None | I |
R/F | 0.7531 | likely_pathogenic | 0.8378 | pathogenic | -0.197 | Destabilizing | 0.989 | D | 0.66 | neutral | None | None | None | None | I |
R/G | 0.4786 | ambiguous | 0.6135 | pathogenic | -0.139 | Destabilizing | 0.886 | D | 0.555 | neutral | N | 0.495642014 | None | None | I |
R/H | 0.163 | likely_benign | 0.2189 | benign | -0.645 | Destabilizing | 0.989 | D | 0.583 | neutral | None | None | None | None | I |
R/I | 0.4808 | ambiguous | 0.6035 | pathogenic | 0.485 | Stabilizing | 0.958 | D | 0.671 | neutral | N | 0.517902799 | None | None | I |
R/K | 0.117 | likely_benign | 0.1353 | benign | -0.087 | Destabilizing | 0.003 | N | 0.309 | neutral | N | 0.430686459 | None | None | I |
R/L | 0.4319 | ambiguous | 0.5606 | ambiguous | 0.485 | Stabilizing | 0.81 | D | 0.555 | neutral | None | None | None | None | I |
R/M | 0.4936 | ambiguous | 0.6151 | pathogenic | 0.011 | Stabilizing | 0.997 | D | 0.575 | neutral | None | None | None | None | I |
R/N | 0.7938 | likely_pathogenic | 0.8641 | pathogenic | 0.062 | Stabilizing | 0.973 | D | 0.551 | neutral | None | None | None | None | I |
R/P | 0.4957 | ambiguous | 0.6427 | pathogenic | 0.358 | Stabilizing | 0.987 | D | 0.643 | neutral | None | None | None | None | I |
R/Q | 0.1806 | likely_benign | 0.2361 | benign | 0.001 | Stabilizing | 0.964 | D | 0.561 | neutral | None | None | None | None | I |
R/S | 0.7447 | likely_pathogenic | 0.8347 | pathogenic | -0.212 | Destabilizing | 0.886 | D | 0.593 | neutral | N | 0.479691127 | None | None | I |
R/T | 0.5362 | ambiguous | 0.6754 | pathogenic | -0.023 | Destabilizing | 0.965 | D | 0.554 | neutral | N | 0.476093462 | None | None | I |
R/V | 0.5231 | ambiguous | 0.642 | pathogenic | 0.358 | Stabilizing | 0.957 | D | 0.669 | neutral | None | None | None | None | I |
R/W | 0.2951 | likely_benign | 0.3942 | ambiguous | -0.302 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
R/Y | 0.5692 | likely_pathogenic | 0.6795 | pathogenic | 0.111 | Stabilizing | 0.989 | D | 0.644 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.