Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28974 | 87145;87146;87147 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
N2AB | 27333 | 82222;82223;82224 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
N2A | 26406 | 79441;79442;79443 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
N2B | 19909 | 59950;59951;59952 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
Novex-1 | 20034 | 60325;60326;60327 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
Novex-2 | 20101 | 60526;60527;60528 | chr2:178558539;178558538;178558537 | chr2:179423266;179423265;179423264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs762434090 | -2.484 | 0.732 | N | 0.764 | 0.516 | 0.789066735824 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/T | rs762434090 | -2.484 | 0.732 | N | 0.764 | 0.516 | 0.789066735824 | gnomAD-4.0.0 | 4.10538E-06 | None | None | None | None | I | None | 2.98739E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69836E-06 | 2.31879E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7653 | likely_pathogenic | 0.8403 | pathogenic | -2.536 | Highly Destabilizing | 0.858 | D | 0.659 | neutral | None | None | None | None | I |
I/C | 0.9379 | likely_pathogenic | 0.9477 | pathogenic | -1.566 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | I |
I/D | 0.9907 | likely_pathogenic | 0.9929 | pathogenic | -2.749 | Highly Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | I |
I/E | 0.9806 | likely_pathogenic | 0.9852 | pathogenic | -2.622 | Highly Destabilizing | 0.984 | D | 0.774 | deleterious | None | None | None | None | I |
I/F | 0.7922 | likely_pathogenic | 0.8483 | pathogenic | -1.698 | Destabilizing | 0.927 | D | 0.739 | prob.delet. | D | 0.522397229 | None | None | I |
I/G | 0.9659 | likely_pathogenic | 0.977 | pathogenic | -2.994 | Highly Destabilizing | 0.988 | D | 0.765 | deleterious | None | None | None | None | I |
I/H | 0.9802 | likely_pathogenic | 0.9863 | pathogenic | -2.411 | Highly Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | I |
I/K | 0.9762 | likely_pathogenic | 0.9812 | pathogenic | -2.009 | Highly Destabilizing | 0.716 | D | 0.775 | deleterious | None | None | None | None | I |
I/L | 0.2519 | likely_benign | 0.3033 | benign | -1.249 | Destabilizing | 0.024 | N | 0.497 | neutral | N | 0.513155914 | None | None | I |
I/M | 0.3211 | likely_benign | 0.3807 | ambiguous | -0.879 | Destabilizing | 0.792 | D | 0.697 | prob.neutral | N | 0.516538333 | None | None | I |
I/N | 0.7901 | likely_pathogenic | 0.8043 | pathogenic | -2.06 | Highly Destabilizing | 0.995 | D | 0.79 | deleterious | D | 0.544050337 | None | None | I |
I/P | 0.8977 | likely_pathogenic | 0.9284 | pathogenic | -1.656 | Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | I |
I/Q | 0.9711 | likely_pathogenic | 0.9786 | pathogenic | -2.091 | Highly Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | I |
I/R | 0.9642 | likely_pathogenic | 0.9717 | pathogenic | -1.474 | Destabilizing | 0.971 | D | 0.791 | deleterious | None | None | None | None | I |
I/S | 0.8464 | likely_pathogenic | 0.8861 | pathogenic | -2.677 | Highly Destabilizing | 0.97 | D | 0.731 | prob.delet. | D | 0.543289869 | None | None | I |
I/T | 0.604 | likely_pathogenic | 0.6444 | pathogenic | -2.428 | Highly Destabilizing | 0.732 | D | 0.764 | deleterious | N | 0.509056368 | None | None | I |
I/V | 0.0857 | likely_benign | 0.0945 | benign | -1.656 | Destabilizing | None | N | 0.271 | neutral | N | 0.473770806 | None | None | I |
I/W | 0.9911 | likely_pathogenic | 0.9941 | pathogenic | -2.045 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/Y | 0.9599 | likely_pathogenic | 0.9711 | pathogenic | -1.808 | Destabilizing | 0.8 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.