Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28976 | 87151;87152;87153 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
N2AB | 27335 | 82228;82229;82230 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
N2A | 26408 | 79447;79448;79449 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
N2B | 19911 | 59956;59957;59958 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
Novex-1 | 20036 | 60331;60332;60333 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
Novex-2 | 20103 | 60532;60533;60534 | chr2:178558533;178558532;178558531 | chr2:179423260;179423259;179423258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs1392632968 | -0.128 | 0.784 | N | 0.553 | 0.259 | 0.47290127212 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
H/P | rs1392632968 | -0.128 | 0.784 | N | 0.553 | 0.259 | 0.47290127212 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85814E-06 | 0 | 0 |
H/R | rs1392632968 | None | 0.642 | N | 0.355 | 0.18 | 0.279776271856 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs1392632968 | None | 0.642 | N | 0.355 | 0.18 | 0.279776271856 | gnomAD-4.0.0 | 1.31334E-05 | None | None | None | None | I | None | 0 | 1.30856E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2328 | likely_benign | 0.1919 | benign | -1.201 | Destabilizing | 0.085 | N | 0.34 | neutral | None | None | None | None | I |
H/C | 0.124 | likely_benign | 0.1085 | benign | -0.283 | Destabilizing | 0.981 | D | 0.488 | neutral | None | None | None | None | I |
H/D | 0.2497 | likely_benign | 0.2144 | benign | -0.912 | Destabilizing | 0.27 | N | 0.349 | neutral | N | 0.434862915 | None | None | I |
H/E | 0.3811 | ambiguous | 0.3554 | ambiguous | -0.767 | Destabilizing | 0.495 | N | 0.299 | neutral | None | None | None | None | I |
H/F | 0.3482 | ambiguous | 0.3301 | benign | 0.431 | Stabilizing | 0.981 | D | 0.582 | neutral | None | None | None | None | I |
H/G | 0.1644 | likely_benign | 0.1392 | benign | -1.598 | Destabilizing | 0.001 | N | 0.243 | neutral | None | None | None | None | I |
H/I | 0.569 | likely_pathogenic | 0.5234 | ambiguous | -0.068 | Destabilizing | 0.828 | D | 0.602 | neutral | None | None | None | None | I |
H/K | 0.3183 | likely_benign | 0.2935 | benign | -0.863 | Destabilizing | 0.495 | N | 0.351 | neutral | None | None | None | None | I |
H/L | 0.2092 | likely_benign | 0.1956 | benign | -0.068 | Destabilizing | 0.425 | N | 0.422 | neutral | N | 0.51016875 | None | None | I |
H/M | 0.5642 | likely_pathogenic | 0.5042 | ambiguous | -0.224 | Destabilizing | 0.981 | D | 0.509 | neutral | None | None | None | None | I |
H/N | 0.0792 | likely_benign | 0.0622 | benign | -1.167 | Destabilizing | 0.01 | N | 0.121 | neutral | N | 0.393496295 | None | None | I |
H/P | 0.8372 | likely_pathogenic | 0.8235 | pathogenic | -0.429 | Destabilizing | 0.784 | D | 0.553 | neutral | N | 0.468495176 | None | None | I |
H/Q | 0.1815 | likely_benign | 0.1586 | benign | -0.844 | Destabilizing | 0.784 | D | 0.382 | neutral | N | 0.4662819 | None | None | I |
H/R | 0.1233 | likely_benign | 0.1276 | benign | -1.282 | Destabilizing | 0.642 | D | 0.355 | neutral | N | 0.438479223 | None | None | I |
H/S | 0.1411 | likely_benign | 0.1084 | benign | -1.221 | Destabilizing | 0.013 | N | 0.163 | neutral | None | None | None | None | I |
H/T | 0.2684 | likely_benign | 0.2161 | benign | -0.97 | Destabilizing | 0.329 | N | 0.377 | neutral | None | None | None | None | I |
H/V | 0.4352 | ambiguous | 0.3923 | ambiguous | -0.429 | Destabilizing | 0.704 | D | 0.479 | neutral | None | None | None | None | I |
H/W | 0.481 | ambiguous | 0.4968 | ambiguous | 0.884 | Stabilizing | 0.995 | D | 0.515 | neutral | None | None | None | None | I |
H/Y | 0.1048 | likely_benign | 0.1034 | benign | 0.819 | Stabilizing | 0.917 | D | 0.415 | neutral | N | 0.452179239 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.