Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28977 | 87154;87155;87156 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
N2AB | 27336 | 82231;82232;82233 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
N2A | 26409 | 79450;79451;79452 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
N2B | 19912 | 59959;59960;59961 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
Novex-1 | 20037 | 60334;60335;60336 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
Novex-2 | 20104 | 60535;60536;60537 | chr2:178558530;178558529;178558528 | chr2:179423257;179423256;179423255 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs776958326 | -1.697 | 1.0 | D | 0.856 | 0.852 | 0.871318523177 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
Y/C | rs776958326 | -1.697 | 1.0 | D | 0.856 | 0.852 | 0.871318523177 | gnomAD-4.0.0 | 2.05267E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69838E-06 | 0 | 0 |
Y/H | None | None | 1.0 | D | 0.803 | 0.884 | 0.757445817929 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9927 | likely_pathogenic | 0.9945 | pathogenic | -3.469 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/C | 0.8223 | likely_pathogenic | 0.8631 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.656530823 | None | None | N |
Y/D | 0.9945 | likely_pathogenic | 0.9952 | pathogenic | -3.751 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.656732627 | None | None | N |
Y/E | 0.9985 | likely_pathogenic | 0.9987 | pathogenic | -3.542 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/F | 0.2053 | likely_benign | 0.2249 | benign | -1.355 | Destabilizing | 0.999 | D | 0.642 | neutral | D | 0.561395113 | None | None | N |
Y/G | 0.9827 | likely_pathogenic | 0.9852 | pathogenic | -3.854 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/H | 0.9457 | likely_pathogenic | 0.9576 | pathogenic | -2.505 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.656127214 | None | None | N |
Y/I | 0.9564 | likely_pathogenic | 0.9652 | pathogenic | -2.156 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/K | 0.9978 | likely_pathogenic | 0.9982 | pathogenic | -2.317 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Y/L | 0.9228 | likely_pathogenic | 0.9412 | pathogenic | -2.156 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
Y/M | 0.9744 | likely_pathogenic | 0.982 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/N | 0.9667 | likely_pathogenic | 0.9726 | pathogenic | -3.064 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.656530823 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -2.613 | Highly Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
Y/Q | 0.9956 | likely_pathogenic | 0.9967 | pathogenic | -2.833 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/R | 0.989 | likely_pathogenic | 0.9913 | pathogenic | -2.073 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Y/S | 0.9719 | likely_pathogenic | 0.9791 | pathogenic | -3.361 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.656530823 | None | None | N |
Y/T | 0.9883 | likely_pathogenic | 0.9914 | pathogenic | -3.042 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/V | 0.9227 | likely_pathogenic | 0.9386 | pathogenic | -2.613 | Highly Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Y/W | 0.8278 | likely_pathogenic | 0.8382 | pathogenic | -0.567 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.