Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28978 | 87157;87158;87159 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
N2AB | 27337 | 82234;82235;82236 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
N2A | 26410 | 79453;79454;79455 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
N2B | 19913 | 59962;59963;59964 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
Novex-1 | 20038 | 60337;60338;60339 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
Novex-2 | 20105 | 60538;60539;60540 | chr2:178558527;178558526;178558525 | chr2:179423254;179423253;179423252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.052 | N | 0.511 | 0.178 | 0.671759834441 | gnomAD-4.0.0 | 6.15797E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09507E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1623 | likely_benign | 0.1559 | benign | -2.568 | Highly Destabilizing | 0.052 | N | 0.511 | neutral | N | 0.471582594 | None | None | N |
V/C | 0.5096 | ambiguous | 0.5005 | ambiguous | -1.928 | Destabilizing | 0.935 | D | 0.594 | neutral | None | None | None | None | N |
V/D | 0.4367 | ambiguous | 0.416 | ambiguous | -3.515 | Highly Destabilizing | 0.484 | N | 0.631 | neutral | N | 0.477254134 | None | None | N |
V/E | 0.2843 | likely_benign | 0.2773 | benign | -3.256 | Highly Destabilizing | 0.555 | D | 0.625 | neutral | None | None | None | None | N |
V/F | 0.1322 | likely_benign | 0.123 | benign | -1.533 | Destabilizing | 0.117 | N | 0.644 | neutral | N | 0.508552597 | None | None | N |
V/G | 0.3138 | likely_benign | 0.282 | benign | -3.088 | Highly Destabilizing | 0.484 | N | 0.653 | neutral | N | 0.484206347 | None | None | N |
V/H | 0.3173 | likely_benign | 0.3195 | benign | -2.873 | Highly Destabilizing | 0.935 | D | 0.628 | neutral | None | None | None | None | N |
V/I | 0.0621 | likely_benign | 0.0654 | benign | -1.061 | Destabilizing | None | N | 0.202 | neutral | N | 0.459894645 | None | None | N |
V/K | 0.2495 | likely_benign | 0.2602 | benign | -2.271 | Highly Destabilizing | 0.555 | D | 0.627 | neutral | None | None | None | None | N |
V/L | 0.0976 | likely_benign | 0.1049 | benign | -1.061 | Destabilizing | None | N | 0.243 | neutral | N | 0.440346092 | None | None | N |
V/M | 0.0909 | likely_benign | 0.0929 | benign | -1.113 | Destabilizing | 0.38 | N | 0.63 | neutral | None | None | None | None | N |
V/N | 0.2301 | likely_benign | 0.2264 | benign | -2.756 | Highly Destabilizing | 0.791 | D | 0.617 | neutral | None | None | None | None | N |
V/P | 0.9451 | likely_pathogenic | 0.9495 | pathogenic | -1.546 | Destabilizing | 0.791 | D | 0.597 | neutral | None | None | None | None | N |
V/Q | 0.225 | likely_benign | 0.2298 | benign | -2.526 | Highly Destabilizing | 0.791 | D | 0.599 | neutral | None | None | None | None | N |
V/R | 0.1876 | likely_benign | 0.2037 | benign | -2.066 | Highly Destabilizing | 0.555 | D | 0.625 | neutral | None | None | None | None | N |
V/S | 0.1977 | likely_benign | 0.1869 | benign | -3.253 | Highly Destabilizing | 0.262 | N | 0.624 | neutral | None | None | None | None | N |
V/T | 0.1197 | likely_benign | 0.1237 | benign | -2.873 | Highly Destabilizing | 0.149 | N | 0.595 | neutral | None | None | None | None | N |
V/W | 0.576 | likely_pathogenic | 0.5776 | pathogenic | -2.152 | Highly Destabilizing | 0.935 | D | 0.646 | neutral | None | None | None | None | N |
V/Y | 0.3647 | ambiguous | 0.3487 | ambiguous | -1.853 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.