Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2898 | 8917;8918;8919 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
N2AB | 2898 | 8917;8918;8919 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
N2A | 2898 | 8917;8918;8919 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
N2B | 2852 | 8779;8780;8781 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
Novex-1 | 2852 | 8779;8780;8781 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
Novex-2 | 2852 | 8779;8780;8781 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
Novex-3 | 2898 | 8917;8918;8919 | chr2:178769889;178769888;178769887 | chr2:179634616;179634615;179634614 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.083 | 0.044 | 0.119812018005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0969 | likely_benign | 0.0868 | benign | -0.578 | Destabilizing | None | N | 0.083 | neutral | N | 0.50517243 | None | None | N |
T/C | 0.5767 | likely_pathogenic | 0.5544 | ambiguous | -0.267 | Destabilizing | 0.676 | D | 0.397 | neutral | None | None | None | None | N |
T/D | 0.5243 | ambiguous | 0.507 | ambiguous | 0.048 | Stabilizing | 0.038 | N | 0.383 | neutral | None | None | None | None | N |
T/E | 0.3817 | ambiguous | 0.3879 | ambiguous | 0.008 | Stabilizing | 0.038 | N | 0.407 | neutral | None | None | None | None | N |
T/F | 0.3951 | ambiguous | 0.3851 | ambiguous | -0.818 | Destabilizing | 0.356 | N | 0.458 | neutral | None | None | None | None | N |
T/G | 0.395 | ambiguous | 0.3546 | ambiguous | -0.786 | Destabilizing | 0.016 | N | 0.357 | neutral | None | None | None | None | N |
T/H | 0.4166 | ambiguous | 0.3805 | ambiguous | -1.066 | Destabilizing | 0.356 | N | 0.417 | neutral | None | None | None | None | N |
T/I | 0.2243 | likely_benign | 0.253 | benign | -0.132 | Destabilizing | 0.029 | N | 0.397 | neutral | D | 0.591212644 | None | None | N |
T/K | 0.3013 | likely_benign | 0.3225 | benign | -0.539 | Destabilizing | 0.038 | N | 0.398 | neutral | None | None | None | None | N |
T/L | 0.1458 | likely_benign | 0.1493 | benign | -0.132 | Destabilizing | 0.016 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.0992 | likely_benign | 0.0974 | benign | 0.152 | Stabilizing | 0.356 | N | 0.406 | neutral | None | None | None | None | N |
T/N | 0.1719 | likely_benign | 0.1414 | benign | -0.336 | Destabilizing | None | N | 0.186 | neutral | N | 0.512268375 | None | None | N |
T/P | 0.1426 | likely_benign | 0.1359 | benign | -0.249 | Destabilizing | 0.171 | N | 0.463 | neutral | N | 0.514739675 | None | None | N |
T/Q | 0.297 | likely_benign | 0.2914 | benign | -0.549 | Destabilizing | 0.214 | N | 0.449 | neutral | None | None | None | None | N |
T/R | 0.2672 | likely_benign | 0.2782 | benign | -0.259 | Destabilizing | 0.214 | N | 0.454 | neutral | None | None | None | None | N |
T/S | 0.1571 | likely_benign | 0.115 | benign | -0.605 | Destabilizing | None | N | 0.115 | neutral | N | 0.475794998 | None | None | N |
T/V | 0.1523 | likely_benign | 0.1739 | benign | -0.249 | Destabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
T/W | 0.7556 | likely_pathogenic | 0.728 | pathogenic | -0.772 | Destabilizing | 0.864 | D | 0.477 | neutral | None | None | None | None | N |
T/Y | 0.4181 | ambiguous | 0.3923 | ambiguous | -0.53 | Destabilizing | 0.356 | N | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.