Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28982 | 87169;87170;87171 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
N2AB | 27341 | 82246;82247;82248 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
N2A | 26414 | 79465;79466;79467 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
N2B | 19917 | 59974;59975;59976 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
Novex-1 | 20042 | 60349;60350;60351 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
Novex-2 | 20109 | 60550;60551;60552 | chr2:178558515;178558514;178558513 | chr2:179423242;179423241;179423240 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs767470225 | None | 0.781 | N | 0.797 | 0.308 | 0.716020962526 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1861 | likely_benign | 0.189 | benign | -2.195 | Highly Destabilizing | 0.25 | N | 0.52 | neutral | None | None | None | None | N |
L/C | 0.3968 | ambiguous | 0.4032 | ambiguous | -1.099 | Destabilizing | 0.947 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/D | 0.9155 | likely_pathogenic | 0.9277 | pathogenic | -2.62 | Highly Destabilizing | 0.7 | D | 0.793 | deleterious | None | None | None | None | N |
L/E | 0.4465 | ambiguous | 0.4461 | ambiguous | -2.36 | Highly Destabilizing | 0.539 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/F | 0.1887 | likely_benign | 0.1995 | benign | -1.246 | Destabilizing | 0.7 | D | 0.609 | neutral | None | None | None | None | N |
L/G | 0.6178 | likely_pathogenic | 0.6357 | pathogenic | -2.728 | Highly Destabilizing | 0.7 | D | 0.768 | deleterious | None | None | None | None | N |
L/H | 0.3043 | likely_benign | 0.3284 | benign | -2.402 | Highly Destabilizing | 0.947 | D | 0.758 | deleterious | None | None | None | None | N |
L/I | 0.1072 | likely_benign | 0.105 | benign | -0.63 | Destabilizing | 0.08 | N | 0.483 | neutral | N | 0.488446683 | None | None | N |
L/K | 0.2121 | likely_benign | 0.2119 | benign | -1.371 | Destabilizing | 0.539 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/M | 0.0731 | likely_benign | 0.0729 | benign | -0.627 | Destabilizing | 0.7 | D | 0.621 | neutral | None | None | None | None | N |
L/N | 0.6229 | likely_pathogenic | 0.6347 | pathogenic | -1.818 | Destabilizing | 0.7 | D | 0.796 | deleterious | None | None | None | None | N |
L/P | 0.9611 | likely_pathogenic | 0.9693 | pathogenic | -1.137 | Destabilizing | 0.781 | D | 0.797 | deleterious | N | 0.47317921 | None | None | N |
L/Q | 0.0893 | likely_benign | 0.09 | benign | -1.592 | Destabilizing | 0.034 | N | 0.416 | neutral | N | 0.388223761 | None | None | N |
L/R | 0.1389 | likely_benign | 0.1472 | benign | -1.337 | Destabilizing | 0.468 | N | 0.738 | prob.delet. | N | 0.365173543 | None | None | N |
L/S | 0.2916 | likely_benign | 0.2973 | benign | -2.394 | Highly Destabilizing | 0.539 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/T | 0.2197 | likely_benign | 0.2132 | benign | -2.0 | Highly Destabilizing | 0.539 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/V | 0.0831 | likely_benign | 0.08 | benign | -1.137 | Destabilizing | 0.002 | N | 0.366 | neutral | N | 0.517806798 | None | None | N |
L/W | 0.3127 | likely_benign | 0.3669 | ambiguous | -1.715 | Destabilizing | 0.982 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/Y | 0.439 | ambiguous | 0.4755 | ambiguous | -1.378 | Destabilizing | 0.826 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.