Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28983 | 87172;87173;87174 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
N2AB | 27342 | 82249;82250;82251 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
N2A | 26415 | 79468;79469;79470 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
N2B | 19918 | 59977;59978;59979 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
Novex-1 | 20043 | 60352;60353;60354 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
Novex-2 | 20110 | 60553;60554;60555 | chr2:178558512;178558511;178558510 | chr2:179423239;179423238;179423237 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.621 | 0.332 | 0.368743488249 | gnomAD-4.0.0 | 1.32035E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44375E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.224 | likely_benign | 0.2229 | benign | -0.794 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.472402582 | None | None | N |
E/C | 0.8864 | likely_pathogenic | 0.8792 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/D | 0.3951 | ambiguous | 0.4614 | ambiguous | -0.919 | Destabilizing | 0.999 | D | 0.445 | neutral | N | 0.474114736 | None | None | N |
E/F | 0.8914 | likely_pathogenic | 0.9013 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/G | 0.279 | likely_benign | 0.2928 | benign | -1.188 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.508651384 | None | None | N |
E/H | 0.6949 | likely_pathogenic | 0.7173 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/I | 0.5029 | ambiguous | 0.4893 | ambiguous | 0.292 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.2849 | likely_benign | 0.2745 | benign | -0.359 | Destabilizing | 0.999 | D | 0.572 | neutral | N | 0.460684079 | None | None | N |
E/L | 0.4002 | ambiguous | 0.396 | ambiguous | 0.292 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/M | 0.5678 | likely_pathogenic | 0.5597 | ambiguous | 0.671 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/N | 0.607 | likely_pathogenic | 0.6462 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/P | 0.4562 | ambiguous | 0.464 | ambiguous | -0.049 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/Q | 0.1519 | likely_benign | 0.1471 | benign | -0.854 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.512939696 | None | None | N |
E/R | 0.4001 | ambiguous | 0.4015 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/S | 0.431 | ambiguous | 0.455 | ambiguous | -1.344 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/T | 0.5003 | ambiguous | 0.5001 | ambiguous | -1.002 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/V | 0.3048 | likely_benign | 0.2966 | benign | -0.049 | Destabilizing | 1.0 | D | 0.778 | deleterious | N | 0.475068995 | None | None | N |
E/W | 0.9529 | likely_pathogenic | 0.9622 | pathogenic | 0.392 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/Y | 0.8396 | likely_pathogenic | 0.8598 | pathogenic | 0.344 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.