Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28987 | 87184;87185;87186 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
N2AB | 27346 | 82261;82262;82263 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
N2A | 26419 | 79480;79481;79482 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
N2B | 19922 | 59989;59990;59991 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
Novex-1 | 20047 | 60364;60365;60366 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
Novex-2 | 20114 | 60565;60566;60567 | chr2:178558500;178558499;178558498 | chr2:179423227;179423226;179423225 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1186947794 | 0.179 | 0.012 | N | 0.385 | 0.082 | 0.30212335484 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs1186947794 | 0.179 | 0.012 | N | 0.385 | 0.082 | 0.30212335484 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1186947794 | 0.179 | 0.012 | N | 0.385 | 0.082 | 0.30212335484 | gnomAD-4.0.0 | 5.12438E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.17851E-06 | 1.33994E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2049 | likely_benign | 0.174 | benign | -0.025 | Destabilizing | 0.016 | N | 0.459 | neutral | None | None | None | None | N |
K/C | 0.5002 | ambiguous | 0.4998 | ambiguous | -0.531 | Destabilizing | 0.676 | D | 0.279 | neutral | None | None | None | None | N |
K/D | 0.2532 | likely_benign | 0.231 | benign | -0.368 | Destabilizing | 0.016 | N | 0.44 | neutral | None | None | None | None | N |
K/E | 0.1026 | likely_benign | 0.0908 | benign | -0.387 | Destabilizing | None | N | 0.137 | neutral | N | 0.383663303 | None | None | N |
K/F | 0.6214 | likely_pathogenic | 0.6082 | pathogenic | -0.394 | Destabilizing | 0.356 | N | 0.308 | neutral | None | None | None | None | N |
K/G | 0.2028 | likely_benign | 0.1933 | benign | -0.132 | Destabilizing | 0.031 | N | 0.307 | neutral | None | None | None | None | N |
K/H | 0.2294 | likely_benign | 0.2299 | benign | -0.186 | Destabilizing | 0.356 | N | 0.373 | neutral | None | None | None | None | N |
K/I | 0.2942 | likely_benign | 0.2617 | benign | 0.176 | Stabilizing | 0.093 | N | 0.338 | neutral | N | 0.468668844 | None | None | N |
K/L | 0.2431 | likely_benign | 0.2268 | benign | 0.176 | Stabilizing | 0.016 | N | 0.308 | neutral | None | None | None | None | N |
K/M | 0.1846 | likely_benign | 0.1721 | benign | -0.191 | Destabilizing | 0.356 | N | 0.371 | neutral | None | None | None | None | N |
K/N | 0.1837 | likely_benign | 0.1693 | benign | -0.066 | Destabilizing | 0.055 | N | 0.365 | neutral | N | 0.398171396 | None | None | N |
K/P | 0.288 | likely_benign | 0.2536 | benign | 0.13 | Stabilizing | 0.136 | N | 0.391 | neutral | None | None | None | None | N |
K/Q | 0.0961 | likely_benign | 0.0896 | benign | -0.207 | Destabilizing | None | N | 0.137 | neutral | N | 0.409561825 | None | None | N |
K/R | 0.081 | likely_benign | 0.0823 | benign | -0.152 | Destabilizing | 0.012 | N | 0.385 | neutral | N | 0.431323964 | None | None | N |
K/S | 0.2076 | likely_benign | 0.1836 | benign | -0.412 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | N |
K/T | 0.1241 | likely_benign | 0.1045 | benign | -0.324 | Destabilizing | None | N | 0.223 | neutral | N | 0.419778819 | None | None | N |
K/V | 0.2496 | likely_benign | 0.2207 | benign | 0.13 | Stabilizing | 0.038 | N | 0.329 | neutral | None | None | None | None | N |
K/W | 0.584 | likely_pathogenic | 0.6114 | pathogenic | -0.508 | Destabilizing | 0.864 | D | 0.269 | neutral | None | None | None | None | N |
K/Y | 0.4606 | ambiguous | 0.4672 | ambiguous | -0.163 | Destabilizing | 0.356 | N | 0.339 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.