Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2899 | 8920;8921;8922 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
N2AB | 2899 | 8920;8921;8922 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
N2A | 2899 | 8920;8921;8922 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
N2B | 2853 | 8782;8783;8784 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
Novex-1 | 2853 | 8782;8783;8784 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
Novex-2 | 2853 | 8782;8783;8784 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
Novex-3 | 2899 | 8920;8921;8922 | chr2:178769886;178769885;178769884 | chr2:179634613;179634612;179634611 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1561217531 | None | 1.0 | D | 0.599 | 0.565 | 0.530109961917 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.83E-06 | 0 |
A/S | rs1561217531 | None | 1.0 | D | 0.599 | 0.565 | 0.530109961917 | gnomAD-4.0.0 | 1.59053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7513 | likely_pathogenic | 0.8197 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
A/D | 0.9875 | likely_pathogenic | 0.9952 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.727881516 | None | None | N |
A/E | 0.9748 | likely_pathogenic | 0.9899 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
A/F | 0.9206 | likely_pathogenic | 0.9619 | pathogenic | -0.625 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
A/G | 0.5398 | ambiguous | 0.5901 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.581 | neutral | D | 0.705188949 | None | None | N |
A/H | 0.9842 | likely_pathogenic | 0.9936 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/I | 0.5875 | likely_pathogenic | 0.72 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/K | 0.9893 | likely_pathogenic | 0.9962 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/L | 0.6457 | likely_pathogenic | 0.7564 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
A/M | 0.7442 | likely_pathogenic | 0.8485 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
A/N | 0.9689 | likely_pathogenic | 0.9857 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
A/P | 0.9837 | likely_pathogenic | 0.9903 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.764438869 | None | None | N |
A/Q | 0.9608 | likely_pathogenic | 0.9825 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/R | 0.9739 | likely_pathogenic | 0.9887 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.348 | ambiguous | 0.4202 | ambiguous | -1.368 | Destabilizing | 1.0 | D | 0.599 | neutral | D | 0.689355677 | None | None | N |
A/T | 0.2954 | likely_benign | 0.4071 | ambiguous | -1.138 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | D | 0.665696958 | None | None | N |
A/V | 0.2627 | likely_benign | 0.3667 | ambiguous | -0.092 | Destabilizing | 1.0 | D | 0.637 | neutral | N | 0.514386981 | None | None | N |
A/W | 0.996 | likely_pathogenic | 0.9985 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/Y | 0.9762 | likely_pathogenic | 0.9897 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.