Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28998 | 87217;87218;87219 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
N2AB | 27357 | 82294;82295;82296 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
N2A | 26430 | 79513;79514;79515 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
N2B | 19933 | 60022;60023;60024 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
Novex-1 | 20058 | 60397;60398;60399 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
Novex-2 | 20125 | 60598;60599;60600 | chr2:178558467;178558466;178558465 | chr2:179423194;179423193;179423192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.775 | N | 0.4 | 0.373 | 0.233785782151 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85802E-06 | 0 | 0 |
T/I | rs1206763274 | None | 0.789 | N | 0.36 | 0.303 | 0.390531646278 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0822 | likely_benign | 0.0845 | benign | -0.834 | Destabilizing | 0.775 | D | 0.4 | neutral | N | 0.475220353 | None | None | N |
T/C | 0.284 | likely_benign | 0.2675 | benign | -0.367 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
T/D | 0.5787 | likely_pathogenic | 0.6277 | pathogenic | -0.543 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
T/E | 0.5151 | ambiguous | 0.5536 | ambiguous | -0.386 | Destabilizing | 1.0 | D | 0.566 | neutral | None | None | None | None | N |
T/F | 0.3242 | likely_benign | 0.3764 | ambiguous | -0.699 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
T/G | 0.2003 | likely_benign | 0.2106 | benign | -1.217 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
T/H | 0.352 | ambiguous | 0.3935 | ambiguous | -1.319 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/I | 0.1674 | likely_benign | 0.1912 | benign | 0.147 | Stabilizing | 0.789 | D | 0.36 | neutral | N | 0.504285714 | None | None | N |
T/K | 0.3512 | ambiguous | 0.3492 | ambiguous | -0.203 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
T/L | 0.0623 | likely_benign | 0.062 | benign | 0.147 | Stabilizing | 0.971 | D | 0.404 | neutral | None | None | None | None | N |
T/M | 0.0848 | likely_benign | 0.0842 | benign | 0.111 | Stabilizing | 0.971 | D | 0.363 | neutral | None | None | None | None | N |
T/N | 0.1243 | likely_benign | 0.138 | benign | -0.727 | Destabilizing | 0.998 | D | 0.529 | neutral | N | 0.50536315 | None | None | N |
T/P | 0.0748 | likely_benign | 0.0808 | benign | -0.147 | Destabilizing | 0.998 | D | 0.604 | neutral | N | 0.496762309 | None | None | N |
T/Q | 0.2689 | likely_benign | 0.2825 | benign | -0.549 | Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | N |
T/R | 0.2855 | likely_benign | 0.2857 | benign | -0.352 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
T/S | 0.105 | likely_benign | 0.1131 | benign | -1.017 | Destabilizing | 0.944 | D | 0.413 | neutral | N | 0.498223747 | None | None | N |
T/V | 0.1226 | likely_benign | 0.134 | benign | -0.147 | Destabilizing | 0.959 | D | 0.399 | neutral | None | None | None | None | N |
T/W | 0.7309 | likely_pathogenic | 0.7771 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/Y | 0.3965 | ambiguous | 0.4451 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.