Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29000 | 87223;87224;87225 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
N2AB | 27359 | 82300;82301;82302 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
N2A | 26432 | 79519;79520;79521 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
N2B | 19935 | 60028;60029;60030 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
Novex-1 | 20060 | 60403;60404;60405 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
Novex-2 | 20127 | 60604;60605;60606 | chr2:178558461;178558460;178558459 | chr2:179423188;179423187;179423186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs758683372 | None | 0.907 | N | 0.475 | 0.303 | 0.176091768786 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
H/Q | rs758683372 | None | 0.907 | N | 0.475 | 0.303 | 0.176091768786 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2074 | likely_benign | 0.2221 | benign | -0.987 | Destabilizing | 0.228 | N | 0.447 | neutral | None | None | None | None | I |
H/C | 0.0855 | likely_benign | 0.0884 | benign | -0.156 | Destabilizing | 0.983 | D | 0.562 | neutral | None | None | None | None | I |
H/D | 0.4628 | ambiguous | 0.4899 | ambiguous | -0.663 | Destabilizing | 0.523 | D | 0.528 | neutral | N | 0.46778341 | None | None | I |
H/E | 0.3972 | ambiguous | 0.4119 | ambiguous | -0.522 | Destabilizing | 0.593 | D | 0.34 | neutral | None | None | None | None | I |
H/F | 0.1727 | likely_benign | 0.16 | benign | 0.57 | Stabilizing | 0.001 | N | 0.261 | neutral | None | None | None | None | I |
H/G | 0.3472 | ambiguous | 0.3752 | ambiguous | -1.403 | Destabilizing | 0.593 | D | 0.519 | neutral | None | None | None | None | I |
H/I | 0.2069 | likely_benign | 0.1977 | benign | 0.189 | Stabilizing | 0.264 | N | 0.468 | neutral | None | None | None | None | I |
H/K | 0.3882 | ambiguous | 0.3967 | ambiguous | -0.615 | Destabilizing | 0.418 | N | 0.482 | neutral | None | None | None | None | I |
H/L | 0.0974 | likely_benign | 0.0915 | benign | 0.189 | Stabilizing | 0.001 | N | 0.425 | neutral | N | 0.383663303 | None | None | I |
H/M | 0.3502 | ambiguous | 0.3344 | benign | -0.027 | Destabilizing | 0.716 | D | 0.553 | neutral | None | None | None | None | I |
H/N | 0.166 | likely_benign | 0.1776 | benign | -0.902 | Destabilizing | 0.523 | D | 0.414 | neutral | N | 0.515998644 | None | None | I |
H/P | 0.665 | likely_pathogenic | 0.7091 | pathogenic | -0.184 | Destabilizing | 0.921 | D | 0.569 | neutral | N | 0.515998644 | None | None | I |
H/Q | 0.2117 | likely_benign | 0.2152 | benign | -0.582 | Destabilizing | 0.907 | D | 0.475 | neutral | N | 0.478827122 | None | None | I |
H/R | 0.1772 | likely_benign | 0.178 | benign | -1.137 | Destabilizing | 0.523 | D | 0.455 | neutral | N | 0.515825286 | None | None | I |
H/S | 0.2075 | likely_benign | 0.2237 | benign | -0.98 | Destabilizing | 0.418 | N | 0.45 | neutral | None | None | None | None | I |
H/T | 0.1975 | likely_benign | 0.2125 | benign | -0.72 | Destabilizing | 0.593 | D | 0.507 | neutral | None | None | None | None | I |
H/V | 0.1549 | likely_benign | 0.1524 | benign | -0.184 | Destabilizing | 0.129 | N | 0.459 | neutral | None | None | None | None | I |
H/W | 0.4087 | ambiguous | 0.4113 | ambiguous | 1.003 | Stabilizing | 0.836 | D | 0.543 | neutral | None | None | None | None | I |
H/Y | 0.073 | likely_benign | 0.0692 | benign | 0.979 | Stabilizing | 0.001 | N | 0.137 | neutral | N | 0.344046122 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.