Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29018 | 87277;87278;87279 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
N2AB | 27377 | 82354;82355;82356 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
N2A | 26450 | 79573;79574;79575 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
N2B | 19953 | 60082;60083;60084 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
Novex-1 | 20078 | 60457;60458;60459 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
Novex-2 | 20145 | 60658;60659;60660 | chr2:178558407;178558406;178558405 | chr2:179423134;179423133;179423132 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.992 | N | 0.469 | 0.365 | 0.286848849266 | gnomAD-4.0.0 | 4.7898E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52538E-05 | None | 0 | 0 | 4.49729E-06 | 0 | 1.65678E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1738 | likely_benign | 0.1771 | benign | -1.228 | Destabilizing | 0.996 | D | 0.593 | neutral | N | 0.499527682 | None | None | I |
E/C | 0.8384 | likely_pathogenic | 0.8421 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/D | 0.5697 | likely_pathogenic | 0.5636 | ambiguous | -1.648 | Destabilizing | 0.996 | D | 0.407 | neutral | N | 0.474002131 | None | None | I |
E/F | 0.806 | likely_pathogenic | 0.8273 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
E/G | 0.2715 | likely_benign | 0.2658 | benign | -1.633 | Destabilizing | 0.999 | D | 0.761 | deleterious | N | 0.480585496 | None | None | I |
E/H | 0.5906 | likely_pathogenic | 0.634 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
E/I | 0.3599 | ambiguous | 0.3903 | ambiguous | -0.094 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
E/K | 0.1402 | likely_benign | 0.1544 | benign | -1.353 | Destabilizing | 0.992 | D | 0.469 | neutral | N | 0.470861 | None | None | I |
E/L | 0.4947 | ambiguous | 0.5199 | ambiguous | -0.094 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
E/M | 0.425 | ambiguous | 0.4399 | ambiguous | 0.569 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
E/N | 0.6189 | likely_pathogenic | 0.602 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/P | 0.9873 | likely_pathogenic | 0.9905 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
E/Q | 0.1035 | likely_benign | 0.1067 | benign | -1.437 | Destabilizing | 0.957 | D | 0.239 | neutral | N | 0.50212527 | None | None | I |
E/R | 0.257 | likely_benign | 0.2926 | benign | -1.206 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/S | 0.2963 | likely_benign | 0.2866 | benign | -2.23 | Highly Destabilizing | 0.997 | D | 0.557 | neutral | None | None | None | None | I |
E/T | 0.3235 | likely_benign | 0.3355 | benign | -1.866 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
E/V | 0.1852 | likely_benign | 0.214 | benign | -0.453 | Destabilizing | 0.999 | D | 0.826 | deleterious | N | 0.386890035 | None | None | I |
E/W | 0.9369 | likely_pathogenic | 0.9497 | pathogenic | -1.035 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
E/Y | 0.7412 | likely_pathogenic | 0.7692 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.