Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2902 | 8929;8930;8931 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
N2AB | 2902 | 8929;8930;8931 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
N2A | 2902 | 8929;8930;8931 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
N2B | 2856 | 8791;8792;8793 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
Novex-1 | 2856 | 8791;8792;8793 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
Novex-2 | 2856 | 8791;8792;8793 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
Novex-3 | 2902 | 8929;8930;8931 | chr2:178769877;178769876;178769875 | chr2:179634604;179634603;179634602 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs2091213467 | None | 0.977 | D | 0.62 | 0.641 | 0.605955498237 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/A | rs2091213467 | None | 0.977 | D | 0.62 | 0.641 | 0.605955498237 | gnomAD-4.0.0 | 3.84183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.17525E-06 | 0 | 0 |
E/G | None | None | 0.993 | D | 0.737 | 0.706 | 0.705062143596 | gnomAD-4.0.0 | 1.59053E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 0 | 0 |
E/Q | rs143767300 | -0.962 | 0.568 | N | 0.296 | 0.247 | None | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 1.23062E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs143767300 | -0.962 | 0.568 | N | 0.296 | 0.247 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs143767300 | -0.962 | 0.568 | N | 0.296 | 0.247 | None | gnomAD-4.0.0 | 2.5613E-06 | None | None | None | None | N | None | 3.38341E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3219 | likely_benign | 0.319 | benign | -0.804 | Destabilizing | 0.977 | D | 0.62 | neutral | D | 0.641585319 | None | None | N |
E/C | 0.9572 | likely_pathogenic | 0.9576 | pathogenic | -0.434 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/D | 0.5331 | ambiguous | 0.4617 | ambiguous | -1.154 | Destabilizing | 0.977 | D | 0.477 | neutral | D | 0.533216831 | None | None | N |
E/F | 0.9396 | likely_pathogenic | 0.9366 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/G | 0.5818 | likely_pathogenic | 0.5819 | pathogenic | -1.155 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | D | 0.661266666 | None | None | N |
E/H | 0.8011 | likely_pathogenic | 0.812 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.6169 | likely_pathogenic | 0.5934 | pathogenic | 0.144 | Stabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
E/K | 0.4849 | ambiguous | 0.513 | ambiguous | -0.566 | Destabilizing | 0.955 | D | 0.519 | neutral | N | 0.504986905 | None | None | N |
E/L | 0.7454 | likely_pathogenic | 0.7315 | pathogenic | 0.144 | Stabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
E/M | 0.7148 | likely_pathogenic | 0.7106 | pathogenic | 0.564 | Stabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
E/N | 0.663 | likely_pathogenic | 0.6382 | pathogenic | -0.979 | Destabilizing | 0.995 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/P | 0.9858 | likely_pathogenic | 0.9846 | pathogenic | -0.15 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
E/Q | 0.2092 | likely_benign | 0.2375 | benign | -0.875 | Destabilizing | 0.568 | D | 0.296 | neutral | N | 0.506569646 | None | None | N |
E/R | 0.6345 | likely_pathogenic | 0.6793 | pathogenic | -0.317 | Destabilizing | 0.99 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/S | 0.402 | ambiguous | 0.3803 | ambiguous | -1.287 | Destabilizing | 0.983 | D | 0.583 | neutral | None | None | None | None | N |
E/T | 0.393 | ambiguous | 0.3898 | ambiguous | -1.001 | Destabilizing | 0.995 | D | 0.758 | deleterious | None | None | None | None | N |
E/V | 0.4057 | ambiguous | 0.3905 | ambiguous | -0.15 | Destabilizing | 0.997 | D | 0.774 | deleterious | D | 0.604457417 | None | None | N |
E/W | 0.9877 | likely_pathogenic | 0.9878 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/Y | 0.9166 | likely_pathogenic | 0.9147 | pathogenic | -0.125 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.