Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29028 | 87307;87308;87309 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
N2AB | 27387 | 82384;82385;82386 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
N2A | 26460 | 79603;79604;79605 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
N2B | 19963 | 60112;60113;60114 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
Novex-1 | 20088 | 60487;60488;60489 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
Novex-2 | 20155 | 60688;60689;60690 | chr2:178558377;178558376;178558375 | chr2:179423104;179423103;179423102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.991 | N | 0.746 | 0.359 | 0.355034743287 | gnomAD-4.0.0 | 1.59191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85855E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3235 | likely_benign | 0.3151 | benign | -0.061 | Destabilizing | 0.991 | D | 0.746 | deleterious | N | 0.498084887 | None | None | N |
E/C | 0.9286 | likely_pathogenic | 0.9199 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/D | 0.2514 | likely_benign | 0.2509 | benign | -1.015 | Destabilizing | 0.149 | N | 0.305 | neutral | N | 0.466164469 | None | None | N |
E/F | 0.8696 | likely_pathogenic | 0.8655 | pathogenic | 0.854 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
E/G | 0.4533 | ambiguous | 0.4435 | ambiguous | -0.496 | Destabilizing | 0.995 | D | 0.77 | deleterious | N | 0.518998877 | None | None | N |
E/H | 0.7616 | likely_pathogenic | 0.7418 | pathogenic | 0.677 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/I | 0.4764 | ambiguous | 0.4617 | ambiguous | 1.141 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.492 | ambiguous | 0.4326 | ambiguous | -0.237 | Destabilizing | 0.982 | D | 0.743 | deleterious | N | 0.510918111 | None | None | N |
E/L | 0.5349 | ambiguous | 0.5295 | ambiguous | 1.141 | Stabilizing | 0.998 | D | 0.726 | deleterious | None | None | None | None | N |
E/M | 0.5685 | likely_pathogenic | 0.557 | ambiguous | 1.415 | Stabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
E/N | 0.5165 | ambiguous | 0.4913 | ambiguous | -0.962 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
E/P | 0.6538 | likely_pathogenic | 0.6566 | pathogenic | 0.763 | Stabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
E/Q | 0.2579 | likely_benign | 0.2395 | benign | -0.711 | Destabilizing | 0.998 | D | 0.799 | deleterious | N | 0.502933346 | None | None | N |
E/R | 0.6717 | likely_pathogenic | 0.6282 | pathogenic | 0.054 | Stabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
E/S | 0.4172 | ambiguous | 0.4039 | ambiguous | -1.293 | Destabilizing | 0.987 | D | 0.746 | deleterious | None | None | None | None | N |
E/T | 0.4132 | ambiguous | 0.386 | ambiguous | -0.907 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
E/V | 0.2898 | likely_benign | 0.2802 | benign | 0.763 | Stabilizing | 0.999 | D | 0.751 | deleterious | N | 0.516268003 | None | None | N |
E/W | 0.9711 | likely_pathogenic | 0.9699 | pathogenic | 1.027 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/Y | 0.7967 | likely_pathogenic | 0.7898 | pathogenic | 1.128 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.