Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29035 | 87328;87329;87330 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
N2AB | 27394 | 82405;82406;82407 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
N2A | 26467 | 79624;79625;79626 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
N2B | 19970 | 60133;60134;60135 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
Novex-1 | 20095 | 60508;60509;60510 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
Novex-2 | 20162 | 60709;60710;60711 | chr2:178558356;178558355;178558354 | chr2:179423083;179423082;179423081 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs768635896 | -3.338 | 0.006 | N | 0.579 | 0.212 | 0.642006589361 | gnomAD-2.1.1 | 2.03E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.65937E-04 | None | 0 | 0 | 0 |
I/T | rs768635896 | -3.338 | 0.006 | N | 0.579 | 0.212 | 0.642006589361 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
I/T | rs768635896 | -3.338 | 0.006 | N | 0.579 | 0.212 | 0.642006589361 | gnomAD-4.0.0 | 1.41187E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.48444E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.489 | ambiguous | 0.5338 | ambiguous | -3.201 | Highly Destabilizing | 0.007 | N | 0.558 | neutral | None | None | None | None | N |
I/C | 0.7222 | likely_pathogenic | 0.7529 | pathogenic | -2.511 | Highly Destabilizing | 0.204 | N | 0.577 | neutral | None | None | None | None | N |
I/D | 0.9865 | likely_pathogenic | 0.9867 | pathogenic | -3.598 | Highly Destabilizing | 0.204 | N | 0.715 | prob.delet. | None | None | None | None | N |
I/E | 0.9715 | likely_pathogenic | 0.9723 | pathogenic | -3.327 | Highly Destabilizing | 0.068 | N | 0.665 | prob.neutral | None | None | None | None | N |
I/F | 0.5683 | likely_pathogenic | 0.6051 | pathogenic | -1.8 | Destabilizing | 0.026 | N | 0.584 | neutral | N | 0.518892594 | None | None | N |
I/G | 0.8833 | likely_pathogenic | 0.9025 | pathogenic | -3.726 | Highly Destabilizing | 0.068 | N | 0.671 | prob.neutral | None | None | None | None | N |
I/H | 0.9634 | likely_pathogenic | 0.9635 | pathogenic | -3.034 | Highly Destabilizing | 0.747 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/K | 0.957 | likely_pathogenic | 0.9479 | pathogenic | -2.301 | Highly Destabilizing | 0.035 | N | 0.675 | prob.neutral | None | None | None | None | N |
I/L | 0.1851 | likely_benign | 0.1991 | benign | -1.625 | Destabilizing | None | N | 0.316 | neutral | N | 0.477847835 | None | None | N |
I/M | 0.2278 | likely_benign | 0.2571 | benign | -1.909 | Destabilizing | 0.001 | N | 0.328 | neutral | N | 0.475525819 | None | None | N |
I/N | 0.824 | likely_pathogenic | 0.8275 | pathogenic | -2.836 | Highly Destabilizing | 0.162 | N | 0.719 | prob.delet. | N | 0.478354814 | None | None | N |
I/P | 0.8559 | likely_pathogenic | 0.8379 | pathogenic | -2.142 | Highly Destabilizing | 0.439 | N | 0.709 | prob.delet. | None | None | None | None | N |
I/Q | 0.9275 | likely_pathogenic | 0.9325 | pathogenic | -2.599 | Highly Destabilizing | 0.204 | N | 0.719 | prob.delet. | None | None | None | None | N |
I/R | 0.9099 | likely_pathogenic | 0.8998 | pathogenic | -2.106 | Highly Destabilizing | 0.112 | N | 0.723 | deleterious | None | None | None | None | N |
I/S | 0.7013 | likely_pathogenic | 0.7211 | pathogenic | -3.427 | Highly Destabilizing | 0.026 | N | 0.575 | neutral | N | 0.477087366 | None | None | N |
I/T | 0.5481 | ambiguous | 0.5857 | pathogenic | -3.017 | Highly Destabilizing | 0.006 | N | 0.579 | neutral | N | 0.477275258 | None | None | N |
I/V | 0.0567 | likely_benign | 0.0615 | benign | -2.142 | Highly Destabilizing | None | N | 0.091 | neutral | N | 0.375782899 | None | None | N |
I/W | 0.983 | likely_pathogenic | 0.9838 | pathogenic | -2.083 | Highly Destabilizing | 0.747 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/Y | 0.9345 | likely_pathogenic | 0.9388 | pathogenic | -2.0 | Highly Destabilizing | 0.204 | N | 0.659 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.