Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2904 | 8935;8936;8937 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
N2AB | 2904 | 8935;8936;8937 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
N2A | 2904 | 8935;8936;8937 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
N2B | 2858 | 8797;8798;8799 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
Novex-1 | 2858 | 8797;8798;8799 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
Novex-2 | 2858 | 8797;8798;8799 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
Novex-3 | 2904 | 8935;8936;8937 | chr2:178769871;178769870;178769869 | chr2:179634598;179634597;179634596 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs794729583 | None | 0.999 | D | 0.555 | 0.583 | 0.499858025796 | gnomAD-4.0.0 | 6.15665E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51965E-05 | None | 0 | 0 | 0 | 1.15931E-05 | 1.15902E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6912 | likely_pathogenic | 0.5541 | ambiguous | -1.094 | Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.627719197 | None | None | N |
E/C | 0.9883 | likely_pathogenic | 0.9836 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.8755 | likely_pathogenic | 0.8256 | pathogenic | -1.48 | Destabilizing | 0.999 | D | 0.453 | neutral | D | 0.647184484 | None | None | N |
E/F | 0.9893 | likely_pathogenic | 0.9821 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/G | 0.8895 | likely_pathogenic | 0.8112 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.604227927 | None | None | N |
E/H | 0.9619 | likely_pathogenic | 0.9432 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/I | 0.8701 | likely_pathogenic | 0.8142 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
E/K | 0.7948 | likely_pathogenic | 0.6778 | pathogenic | -1.123 | Destabilizing | 0.999 | D | 0.555 | neutral | D | 0.540795114 | None | None | N |
E/L | 0.9413 | likely_pathogenic | 0.8954 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/M | 0.899 | likely_pathogenic | 0.837 | pathogenic | 0.492 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/N | 0.9397 | likely_pathogenic | 0.9087 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/P | 0.998 | likely_pathogenic | 0.9972 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.5693 | likely_pathogenic | 0.4485 | ambiguous | -1.272 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.502365181 | None | None | N |
E/R | 0.8907 | likely_pathogenic | 0.8223 | pathogenic | -0.953 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/S | 0.8125 | likely_pathogenic | 0.7169 | pathogenic | -1.871 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
E/T | 0.7992 | likely_pathogenic | 0.7273 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/V | 0.7072 | likely_pathogenic | 0.6284 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.599142732 | None | None | N |
E/W | 0.9977 | likely_pathogenic | 0.9963 | pathogenic | -0.859 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.9865 | likely_pathogenic | 0.9781 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.