Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29046 | 87361;87362;87363 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
N2AB | 27405 | 82438;82439;82440 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
N2A | 26478 | 79657;79658;79659 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
N2B | 19981 | 60166;60167;60168 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
Novex-1 | 20106 | 60541;60542;60543 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
Novex-2 | 20173 | 60742;60743;60744 | chr2:178558218;178558217;178558216 | chr2:179422945;179422944;179422943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1559264784 | None | 0.985 | N | 0.401 | 0.352 | 0.601307451256 | gnomAD-4.0.0 | 6.87441E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87864E-05 | 0 | 0 | 0 | 0 |
M/K | None | None | 0.994 | N | 0.383 | 0.508 | 0.7005188687 | gnomAD-4.0.0 | 1.37497E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80129E-06 | 0 | 0 |
M/R | rs143975327 | 1.288 | 0.998 | N | 0.34 | 0.551 | None | gnomAD-2.1.1 | 2.13861E-04 | None | None | None | None | N | None | 2.33723E-03 | 0 | None | 0 | 5.27E-05 | None | 0 | None | 0 | 0 | 1.43637E-04 |
M/R | rs143975327 | 1.288 | 0.998 | N | 0.34 | 0.551 | None | gnomAD-3.1.2 | 6.56814E-04 | None | None | None | None | N | None | 2.24259E-03 | 4.57995E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/R | rs143975327 | 1.288 | 0.998 | N | 0.34 | 0.551 | None | 1000 genomes | 5.99042E-04 | None | None | None | None | N | None | 2.3E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
M/R | rs143975327 | 1.288 | 0.998 | N | 0.34 | 0.551 | None | gnomAD-4.0.0 | 1.19481E-04 | None | None | None | None | N | None | 2.37425E-03 | 1.54852E-04 | None | 0 | 0 | None | 0 | 0 | 1.69728E-06 | 0 | 6.42797E-05 |
M/T | rs143975327 | 0.822 | 0.994 | N | 0.4 | 0.487 | 0.726377241608 | gnomAD-2.1.1 | 4.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.11E-06 | 0 |
M/T | rs143975327 | 0.822 | 0.994 | N | 0.4 | 0.487 | 0.726377241608 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/T | rs143975327 | 0.822 | 0.994 | N | 0.4 | 0.487 | 0.726377241608 | gnomAD-4.0.0 | 3.11172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.24316E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7612 | likely_pathogenic | 0.752 | pathogenic | -2.785 | Highly Destabilizing | 0.989 | D | 0.411 | neutral | None | None | None | None | N |
M/C | 0.8244 | likely_pathogenic | 0.8314 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.367 | neutral | None | None | None | None | N |
M/D | 0.9608 | likely_pathogenic | 0.9553 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | N |
M/E | 0.8595 | likely_pathogenic | 0.8521 | pathogenic | -1.297 | Destabilizing | 0.999 | D | 0.407 | neutral | None | None | None | None | N |
M/F | 0.4702 | ambiguous | 0.4381 | ambiguous | -1.479 | Destabilizing | 0.999 | D | 0.319 | neutral | None | None | None | None | N |
M/G | 0.8238 | likely_pathogenic | 0.805 | pathogenic | -3.152 | Highly Destabilizing | 0.995 | D | 0.482 | neutral | None | None | None | None | N |
M/H | 0.8876 | likely_pathogenic | 0.8801 | pathogenic | -2.152 | Highly Destabilizing | 1.0 | D | 0.481 | neutral | None | None | None | None | N |
M/I | 0.5736 | likely_pathogenic | 0.6116 | pathogenic | -1.767 | Destabilizing | 0.985 | D | 0.401 | neutral | N | 0.492185996 | None | None | N |
M/K | 0.6097 | likely_pathogenic | 0.6051 | pathogenic | -1.42 | Destabilizing | 0.994 | D | 0.383 | neutral | N | 0.494786371 | None | None | N |
M/L | 0.1309 | likely_benign | 0.1216 | benign | -1.767 | Destabilizing | 0.927 | D | 0.229 | neutral | N | 0.417282805 | None | None | N |
M/N | 0.8686 | likely_pathogenic | 0.8637 | pathogenic | -1.282 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
M/P | 0.8687 | likely_pathogenic | 0.8506 | pathogenic | -2.087 | Highly Destabilizing | 0.999 | D | 0.45 | neutral | None | None | None | None | N |
M/Q | 0.6821 | likely_pathogenic | 0.6769 | pathogenic | -1.286 | Destabilizing | 0.999 | D | 0.336 | neutral | None | None | None | None | N |
M/R | 0.6187 | likely_pathogenic | 0.5949 | pathogenic | -0.94 | Destabilizing | 0.998 | D | 0.34 | neutral | N | 0.494959729 | None | None | N |
M/S | 0.8121 | likely_pathogenic | 0.8051 | pathogenic | -1.922 | Destabilizing | 0.995 | D | 0.372 | neutral | None | None | None | None | N |
M/T | 0.3993 | ambiguous | 0.3903 | ambiguous | -1.724 | Destabilizing | 0.994 | D | 0.4 | neutral | N | 0.475237818 | None | None | N |
M/V | 0.1624 | likely_benign | 0.1674 | benign | -2.087 | Highly Destabilizing | 0.985 | D | 0.337 | neutral | N | 0.488372112 | None | None | N |
M/W | 0.7796 | likely_pathogenic | 0.7647 | pathogenic | -1.395 | Destabilizing | 1.0 | D | 0.407 | neutral | None | None | None | None | N |
M/Y | 0.8222 | likely_pathogenic | 0.8081 | pathogenic | -1.568 | Destabilizing | 0.999 | D | 0.343 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.