Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29051 | 87376;87377;87378 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
N2AB | 27410 | 82453;82454;82455 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
N2A | 26483 | 79672;79673;79674 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
N2B | 19986 | 60181;60182;60183 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
Novex-1 | 20111 | 60556;60557;60558 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
Novex-2 | 20178 | 60757;60758;60759 | chr2:178558203;178558202;178558201 | chr2:179422930;179422929;179422928 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1702239501 | None | 0.454 | N | 0.387 | 0.096 | 0.130388298395 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/G | rs1702239501 | None | 0.454 | N | 0.387 | 0.096 | 0.130388298395 | gnomAD-4.0.0 | 6.56909E-06 | None | None | None | None | N | None | 0 | 6.54279E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0764 | likely_benign | 0.0783 | benign | -0.18 | Destabilizing | 0.688 | D | 0.407 | neutral | None | None | None | None | N |
S/C | 0.0985 | likely_benign | 0.0907 | benign | -0.277 | Destabilizing | 0.997 | D | 0.474 | neutral | N | 0.462038368 | None | None | N |
S/D | 0.3197 | likely_benign | 0.2517 | benign | -0.059 | Destabilizing | 0.728 | D | 0.379 | neutral | None | None | None | None | N |
S/E | 0.4992 | ambiguous | 0.4057 | ambiguous | -0.158 | Destabilizing | 0.842 | D | 0.39 | neutral | None | None | None | None | N |
S/F | 0.1984 | likely_benign | 0.1916 | benign | -0.848 | Destabilizing | 0.974 | D | 0.555 | neutral | None | None | None | None | N |
S/G | 0.0713 | likely_benign | 0.0639 | benign | -0.261 | Destabilizing | 0.454 | N | 0.387 | neutral | N | 0.390407556 | None | None | N |
S/H | 0.2631 | likely_benign | 0.1726 | benign | -0.602 | Destabilizing | 0.007 | N | 0.229 | neutral | None | None | None | None | N |
S/I | 0.1858 | likely_benign | 0.167 | benign | -0.1 | Destabilizing | 0.966 | D | 0.549 | neutral | N | 0.460304785 | None | None | N |
S/K | 0.5673 | likely_pathogenic | 0.4006 | ambiguous | -0.454 | Destabilizing | 0.842 | D | 0.388 | neutral | None | None | None | None | N |
S/L | 0.1067 | likely_benign | 0.1113 | benign | -0.1 | Destabilizing | 0.842 | D | 0.536 | neutral | None | None | None | None | N |
S/M | 0.1927 | likely_benign | 0.1813 | benign | -0.07 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | N |
S/N | 0.0995 | likely_benign | 0.079 | benign | -0.16 | Destabilizing | 0.012 | N | 0.167 | neutral | N | 0.405491652 | None | None | N |
S/P | 0.2808 | likely_benign | 0.2569 | benign | -0.1 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | N |
S/Q | 0.3885 | ambiguous | 0.2729 | benign | -0.391 | Destabilizing | 0.949 | D | 0.453 | neutral | None | None | None | None | N |
S/R | 0.5013 | ambiguous | 0.3248 | benign | -0.163 | Destabilizing | 0.801 | D | 0.491 | neutral | N | 0.431715461 | None | None | N |
S/T | 0.0884 | likely_benign | 0.0871 | benign | -0.239 | Destabilizing | 0.801 | D | 0.409 | neutral | N | 0.431542103 | None | None | N |
S/V | 0.1698 | likely_benign | 0.1647 | benign | -0.1 | Destabilizing | 0.974 | D | 0.538 | neutral | None | None | None | None | N |
S/W | 0.351 | ambiguous | 0.3041 | benign | -0.934 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | N |
S/Y | 0.1636 | likely_benign | 0.1479 | benign | -0.624 | Destabilizing | 0.949 | D | 0.546 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.