Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29065 | 87418;87419;87420 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
N2AB | 27424 | 82495;82496;82497 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
N2A | 26497 | 79714;79715;79716 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
N2B | 20000 | 60223;60224;60225 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
Novex-1 | 20125 | 60598;60599;60600 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
Novex-2 | 20192 | 60799;60800;60801 | chr2:178558161;178558160;178558159 | chr2:179422888;179422887;179422886 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.896 | N | 0.442 | 0.291 | 0.357929162469 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79888E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1942 | likely_benign | 0.1497 | benign | -0.435 | Destabilizing | 0.896 | D | 0.592 | neutral | N | 0.494962516 | None | None | N |
D/C | 0.6599 | likely_pathogenic | 0.5338 | ambiguous | -0.227 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
D/E | 0.1548 | likely_benign | 0.1156 | benign | -0.743 | Destabilizing | 0.004 | N | 0.193 | neutral | N | 0.397875899 | None | None | N |
D/F | 0.6759 | likely_pathogenic | 0.571 | pathogenic | 0.011 | Stabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | N |
D/G | 0.269 | likely_benign | 0.2132 | benign | -0.789 | Destabilizing | 0.896 | D | 0.519 | neutral | N | 0.514761785 | None | None | N |
D/H | 0.3392 | likely_benign | 0.2569 | benign | -0.246 | Destabilizing | 0.984 | D | 0.645 | neutral | N | 0.477320905 | None | None | N |
D/I | 0.3277 | likely_benign | 0.2509 | benign | 0.495 | Stabilizing | 0.988 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/K | 0.5066 | ambiguous | 0.3977 | ambiguous | -0.334 | Destabilizing | 0.851 | D | 0.522 | neutral | None | None | None | None | N |
D/L | 0.4416 | ambiguous | 0.3497 | ambiguous | 0.495 | Stabilizing | 0.976 | D | 0.661 | neutral | None | None | None | None | N |
D/M | 0.5853 | likely_pathogenic | 0.481 | ambiguous | 0.846 | Stabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/N | 0.113 | likely_benign | 0.0932 | benign | -0.864 | Destabilizing | 0.896 | D | 0.442 | neutral | N | 0.446053848 | None | None | N |
D/P | 0.8217 | likely_pathogenic | 0.7136 | pathogenic | 0.211 | Stabilizing | 0.988 | D | 0.588 | neutral | None | None | None | None | N |
D/Q | 0.3614 | ambiguous | 0.2779 | benign | -0.696 | Destabilizing | 0.851 | D | 0.458 | neutral | None | None | None | None | N |
D/R | 0.5474 | ambiguous | 0.4368 | ambiguous | -0.125 | Destabilizing | 0.976 | D | 0.639 | neutral | None | None | None | None | N |
D/S | 0.1555 | likely_benign | 0.1215 | benign | -1.054 | Destabilizing | 0.919 | D | 0.473 | neutral | None | None | None | None | N |
D/T | 0.2289 | likely_benign | 0.1788 | benign | -0.761 | Destabilizing | 0.919 | D | 0.519 | neutral | None | None | None | None | N |
D/V | 0.1938 | likely_benign | 0.1481 | benign | 0.211 | Stabilizing | 0.984 | D | 0.667 | neutral | N | 0.47139501 | None | None | N |
D/W | 0.9361 | likely_pathogenic | 0.8988 | pathogenic | 0.187 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/Y | 0.3255 | likely_benign | 0.2566 | benign | 0.247 | Stabilizing | 0.995 | D | 0.735 | prob.delet. | N | 0.514935143 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.