Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29068 | 87427;87428;87429 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
N2AB | 27427 | 82504;82505;82506 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
N2A | 26500 | 79723;79724;79725 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
N2B | 20003 | 60232;60233;60234 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
Novex-1 | 20128 | 60607;60608;60609 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
Novex-2 | 20195 | 60808;60809;60810 | chr2:178558152;178558151;178558150 | chr2:179422879;179422878;179422877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs766759385 | -1.675 | 0.005 | N | 0.205 | 0.067 | 0.288352970974 | gnomAD-2.1.1 | 1.24939E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.80777E-04 | None | 0 | 0 | 1.66334E-04 |
I/V | rs766759385 | -1.675 | 0.005 | N | 0.205 | 0.067 | 0.288352970974 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
I/V | rs766759385 | -1.675 | 0.005 | N | 0.205 | 0.067 | 0.288352970974 | gnomAD-4.0.0 | 5.0814E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64528E-04 | 5.933E-06 | 7.79483E-04 | 4.80292E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7851 | likely_pathogenic | 0.7314 | pathogenic | -1.913 | Destabilizing | 0.525 | D | 0.655 | neutral | None | None | None | None | N |
I/C | 0.8347 | likely_pathogenic | 0.8049 | pathogenic | -1.367 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/D | 0.9966 | likely_pathogenic | 0.9945 | pathogenic | -1.234 | Destabilizing | 0.991 | D | 0.82 | deleterious | None | None | None | None | N |
I/E | 0.9899 | likely_pathogenic | 0.984 | pathogenic | -1.2 | Destabilizing | 0.974 | D | 0.815 | deleterious | None | None | None | None | N |
I/F | 0.2209 | likely_benign | 0.1893 | benign | -1.33 | Destabilizing | 0.934 | D | 0.724 | prob.delet. | N | 0.472341946 | None | None | N |
I/G | 0.968 | likely_pathogenic | 0.951 | pathogenic | -2.279 | Highly Destabilizing | 0.974 | D | 0.803 | deleterious | None | None | None | None | N |
I/H | 0.9534 | likely_pathogenic | 0.9362 | pathogenic | -1.472 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
I/K | 0.9673 | likely_pathogenic | 0.9549 | pathogenic | -1.396 | Destabilizing | 0.974 | D | 0.804 | deleterious | None | None | None | None | N |
I/L | 0.1296 | likely_benign | 0.1176 | benign | -0.962 | Destabilizing | 0.002 | N | 0.227 | neutral | N | 0.455313623 | None | None | N |
I/M | 0.205 | likely_benign | 0.1825 | benign | -0.803 | Destabilizing | 0.934 | D | 0.689 | prob.neutral | N | 0.494765499 | None | None | N |
I/N | 0.9567 | likely_pathogenic | 0.9374 | pathogenic | -1.263 | Destabilizing | 0.989 | D | 0.817 | deleterious | N | 0.495272478 | None | None | N |
I/P | 0.9883 | likely_pathogenic | 0.9827 | pathogenic | -1.248 | Destabilizing | 0.991 | D | 0.817 | deleterious | None | None | None | None | N |
I/Q | 0.9665 | likely_pathogenic | 0.9518 | pathogenic | -1.393 | Destabilizing | 0.991 | D | 0.809 | deleterious | None | None | None | None | N |
I/R | 0.942 | likely_pathogenic | 0.9225 | pathogenic | -0.824 | Destabilizing | 0.974 | D | 0.817 | deleterious | None | None | None | None | N |
I/S | 0.9088 | likely_pathogenic | 0.871 | pathogenic | -1.958 | Destabilizing | 0.891 | D | 0.783 | deleterious | N | 0.507166596 | None | None | N |
I/T | 0.8329 | likely_pathogenic | 0.773 | pathogenic | -1.795 | Destabilizing | 0.801 | D | 0.705 | prob.neutral | N | 0.493498052 | None | None | N |
I/V | 0.064 | likely_benign | 0.0635 | benign | -1.248 | Destabilizing | 0.005 | N | 0.205 | neutral | N | 0.444565407 | None | None | N |
I/W | 0.9459 | likely_pathogenic | 0.9318 | pathogenic | -1.401 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
I/Y | 0.7806 | likely_pathogenic | 0.7302 | pathogenic | -1.189 | Destabilizing | 0.974 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.