Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29069 | 87430;87431;87432 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
N2AB | 27428 | 82507;82508;82509 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
N2A | 26501 | 79726;79727;79728 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
N2B | 20004 | 60235;60236;60237 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
Novex-1 | 20129 | 60610;60611;60612 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
Novex-2 | 20196 | 60811;60812;60813 | chr2:178558149;178558148;178558147 | chr2:179422876;179422875;179422874 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.794 | N | 0.369 | 0.464 | 0.304108284078 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0676 | likely_benign | 0.069 | benign | -0.111 | Destabilizing | 0.001 | N | 0.105 | neutral | N | 0.503179354 | None | None | N |
S/C | 0.0888 | likely_benign | 0.0827 | benign | -0.51 | Destabilizing | 0.794 | D | 0.335 | neutral | N | 0.491723625 | None | None | N |
S/D | 0.4832 | ambiguous | 0.4492 | ambiguous | 0.018 | Stabilizing | 0.593 | D | 0.305 | neutral | None | None | None | None | N |
S/E | 0.5011 | ambiguous | 0.4573 | ambiguous | -0.082 | Destabilizing | 0.418 | N | 0.287 | neutral | None | None | None | None | N |
S/F | 0.1188 | likely_benign | 0.1069 | benign | -0.886 | Destabilizing | 0.002 | N | 0.313 | neutral | D | 0.529347235 | None | None | N |
S/G | 0.1063 | likely_benign | 0.1065 | benign | -0.147 | Destabilizing | 0.129 | N | 0.295 | neutral | None | None | None | None | N |
S/H | 0.219 | likely_benign | 0.191 | benign | -0.422 | Destabilizing | 0.94 | D | 0.338 | neutral | None | None | None | None | N |
S/I | 0.1058 | likely_benign | 0.1089 | benign | -0.149 | Destabilizing | 0.264 | N | 0.362 | neutral | None | None | None | None | N |
S/K | 0.4202 | ambiguous | 0.3794 | ambiguous | -0.384 | Destabilizing | 0.418 | N | 0.296 | neutral | None | None | None | None | N |
S/L | 0.0722 | likely_benign | 0.0732 | benign | -0.149 | Destabilizing | 0.129 | N | 0.342 | neutral | None | None | None | None | N |
S/M | 0.1326 | likely_benign | 0.1357 | benign | -0.274 | Destabilizing | 0.061 | N | 0.265 | neutral | None | None | None | None | N |
S/N | 0.1474 | likely_benign | 0.1461 | benign | -0.241 | Destabilizing | 0.593 | D | 0.363 | neutral | None | None | None | None | N |
S/P | 0.8816 | likely_pathogenic | 0.8531 | pathogenic | -0.113 | Destabilizing | 0.794 | D | 0.369 | neutral | N | 0.491216646 | None | None | N |
S/Q | 0.3622 | ambiguous | 0.3312 | benign | -0.414 | Destabilizing | 0.836 | D | 0.376 | neutral | None | None | None | None | N |
S/R | 0.3362 | likely_benign | 0.2921 | benign | -0.152 | Destabilizing | 0.716 | D | 0.369 | neutral | None | None | None | None | N |
S/T | 0.0599 | likely_benign | 0.0635 | benign | -0.32 | Destabilizing | 0.003 | N | 0.096 | neutral | N | 0.432817979 | None | None | N |
S/V | 0.1233 | likely_benign | 0.1242 | benign | -0.113 | Destabilizing | 0.129 | N | 0.341 | neutral | None | None | None | None | N |
S/W | 0.2555 | likely_benign | 0.209 | benign | -1.007 | Destabilizing | 0.983 | D | 0.445 | neutral | None | None | None | None | N |
S/Y | 0.1354 | likely_benign | 0.1178 | benign | -0.667 | Destabilizing | 0.487 | N | 0.407 | neutral | N | 0.491216646 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.