Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29073 | 87442;87443;87444 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
N2AB | 27432 | 82519;82520;82521 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
N2A | 26505 | 79738;79739;79740 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
N2B | 20008 | 60247;60248;60249 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
Novex-1 | 20133 | 60622;60623;60624 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
Novex-2 | 20200 | 60823;60824;60825 | chr2:178558137;178558136;178558135 | chr2:179422864;179422863;179422862 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.811 | N | 0.455 | 0.052 | 0.298745278005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1272 | likely_benign | 0.1239 | benign | -0.801 | Destabilizing | 0.851 | D | 0.509 | neutral | None | None | None | None | I |
L/C | 0.3902 | ambiguous | 0.3517 | ambiguous | -0.614 | Destabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | I |
L/D | 0.5254 | ambiguous | 0.4808 | ambiguous | -0.334 | Destabilizing | 0.976 | D | 0.62 | neutral | None | None | None | None | I |
L/E | 0.272 | likely_benign | 0.2411 | benign | -0.417 | Destabilizing | 0.952 | D | 0.574 | neutral | None | None | None | None | I |
L/F | 0.1038 | likely_benign | 0.0992 | benign | -0.757 | Destabilizing | 0.984 | D | 0.519 | neutral | N | 0.50023505 | None | None | I |
L/G | 0.3754 | ambiguous | 0.3483 | ambiguous | -0.989 | Destabilizing | 0.976 | D | 0.582 | neutral | None | None | None | None | I |
L/H | 0.1668 | likely_benign | 0.1597 | benign | -0.311 | Destabilizing | 0.996 | D | 0.616 | neutral | N | 0.510836045 | None | None | I |
L/I | 0.0785 | likely_benign | 0.0763 | benign | -0.419 | Destabilizing | 0.811 | D | 0.455 | neutral | N | 0.467911987 | None | None | I |
L/K | 0.1792 | likely_benign | 0.1666 | benign | -0.518 | Destabilizing | 0.851 | D | 0.598 | neutral | None | None | None | None | I |
L/M | 0.0922 | likely_benign | 0.0909 | benign | -0.418 | Destabilizing | 0.702 | D | 0.394 | neutral | None | None | None | None | I |
L/N | 0.2536 | likely_benign | 0.2467 | benign | -0.276 | Destabilizing | 0.976 | D | 0.622 | neutral | None | None | None | None | I |
L/P | 0.121 | likely_benign | 0.1095 | benign | -0.513 | Destabilizing | 0.984 | D | 0.621 | neutral | N | 0.452153101 | None | None | I |
L/Q | 0.1106 | likely_benign | 0.1047 | benign | -0.501 | Destabilizing | 0.261 | N | 0.507 | neutral | None | None | None | None | I |
L/R | 0.1531 | likely_benign | 0.137 | benign | 0.046 | Stabilizing | 0.059 | N | 0.455 | neutral | N | 0.485804315 | None | None | I |
L/S | 0.1486 | likely_benign | 0.1451 | benign | -0.728 | Destabilizing | 0.976 | D | 0.578 | neutral | None | None | None | None | I |
L/T | 0.1424 | likely_benign | 0.1359 | benign | -0.703 | Destabilizing | 0.919 | D | 0.567 | neutral | None | None | None | None | I |
L/V | 0.0729 | likely_benign | 0.0699 | benign | -0.513 | Destabilizing | 0.026 | N | 0.259 | neutral | N | 0.480686497 | None | None | I |
L/W | 0.221 | likely_benign | 0.2013 | benign | -0.786 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
L/Y | 0.2368 | likely_benign | 0.221 | benign | -0.542 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.