Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29079 | 87460;87461;87462 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
N2AB | 27438 | 82537;82538;82539 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
N2A | 26511 | 79756;79757;79758 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
N2B | 20014 | 60265;60266;60267 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
Novex-1 | 20139 | 60640;60641;60642 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
Novex-2 | 20206 | 60841;60842;60843 | chr2:178558119;178558118;178558117 | chr2:179422846;179422845;179422844 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1702220233 | None | 1.0 | N | 0.838 | 0.511 | 0.26547132957 | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0857 | likely_benign | 0.0866 | benign | -0.96 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.450639231 | None | None | N |
S/C | 0.0788 | likely_benign | 0.0824 | benign | -0.876 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/D | 0.4898 | ambiguous | 0.5133 | ambiguous | -0.883 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/E | 0.51 | ambiguous | 0.5202 | ambiguous | -0.807 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/F | 0.1217 | likely_benign | 0.1234 | benign | -1.058 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
S/G | 0.1193 | likely_benign | 0.1346 | benign | -1.262 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
S/H | 0.2762 | likely_benign | 0.2792 | benign | -1.677 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
S/I | 0.1301 | likely_benign | 0.142 | benign | -0.239 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/K | 0.6096 | likely_pathogenic | 0.6595 | pathogenic | -0.657 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/L | 0.0684 | likely_benign | 0.0709 | benign | -0.239 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.459995354 | None | None | N |
S/M | 0.1345 | likely_benign | 0.1445 | benign | -0.062 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
S/N | 0.1493 | likely_benign | 0.172 | benign | -0.937 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
S/P | 0.9129 | likely_pathogenic | 0.9365 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.838 | deleterious | N | 0.462920589 | None | None | N |
S/Q | 0.4105 | ambiguous | 0.4233 | ambiguous | -0.999 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
S/R | 0.5345 | ambiguous | 0.582 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/T | 0.0695 | likely_benign | 0.0765 | benign | -0.845 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.46344109 | None | None | N |
S/V | 0.1369 | likely_benign | 0.1422 | benign | -0.446 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
S/W | 0.2553 | likely_benign | 0.2425 | benign | -1.068 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/Y | 0.1439 | likely_benign | 0.1443 | benign | -0.746 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.