Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2908 | 8947;8948;8949 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
N2AB | 2908 | 8947;8948;8949 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
N2A | 2908 | 8947;8948;8949 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
N2B | 2862 | 8809;8810;8811 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
Novex-1 | 2862 | 8809;8810;8811 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
Novex-2 | 2862 | 8809;8810;8811 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
Novex-3 | 2908 | 8947;8948;8949 | chr2:178769859;178769858;178769857 | chr2:179634586;179634585;179634584 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.948 | N | 0.597 | 0.416 | 0.40017627803 | gnomAD-4.0.0 | 1.59049E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9249 | likely_pathogenic | 0.8504 | pathogenic | -0.979 | Destabilizing | 0.992 | D | 0.64 | neutral | None | None | None | None | N |
F/C | 0.8246 | likely_pathogenic | 0.7231 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.50967633 | None | None | N |
F/D | 0.946 | likely_pathogenic | 0.9125 | pathogenic | 0.655 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
F/E | 0.9479 | likely_pathogenic | 0.9211 | pathogenic | 0.633 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/G | 0.9643 | likely_pathogenic | 0.9368 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
F/H | 0.8569 | likely_pathogenic | 0.8064 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
F/I | 0.7468 | likely_pathogenic | 0.6148 | pathogenic | -0.493 | Destabilizing | 0.978 | D | 0.623 | neutral | N | 0.499072437 | None | None | N |
F/K | 0.9609 | likely_pathogenic | 0.9428 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/L | 0.9759 | likely_pathogenic | 0.9552 | pathogenic | -0.493 | Destabilizing | 0.948 | D | 0.597 | neutral | N | 0.47113012 | None | None | N |
F/M | 0.8986 | likely_pathogenic | 0.8359 | pathogenic | -0.427 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
F/N | 0.8966 | likely_pathogenic | 0.8448 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
F/P | 0.9788 | likely_pathogenic | 0.9639 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
F/Q | 0.9292 | likely_pathogenic | 0.8984 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/R | 0.913 | likely_pathogenic | 0.8809 | pathogenic | 0.336 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/S | 0.8599 | likely_pathogenic | 0.7582 | pathogenic | -0.772 | Destabilizing | 0.998 | D | 0.635 | neutral | N | 0.429483707 | None | None | N |
F/T | 0.914 | likely_pathogenic | 0.8423 | pathogenic | -0.703 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
F/V | 0.7108 | likely_pathogenic | 0.5656 | pathogenic | -0.637 | Destabilizing | 0.543 | D | 0.42 | neutral | N | 0.464033452 | None | None | N |
F/W | 0.8047 | likely_pathogenic | 0.7727 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
F/Y | 0.2939 | likely_benign | 0.2596 | benign | -0.289 | Destabilizing | 0.998 | D | 0.595 | neutral | N | 0.482006266 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.