Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29080 | 87463;87464;87465 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
N2AB | 27439 | 82540;82541;82542 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
N2A | 26512 | 79759;79760;79761 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
N2B | 20015 | 60268;60269;60270 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
Novex-1 | 20140 | 60643;60644;60645 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
Novex-2 | 20207 | 60844;60845;60846 | chr2:178558116;178558115;178558114 | chr2:179422843;179422842;179422841 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs760115899 | -2.444 | 0.324 | N | 0.528 | 0.34 | 0.326074293725 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
R/G | rs760115899 | -2.444 | 0.324 | N | 0.528 | 0.34 | 0.326074293725 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4867 | ambiguous | 0.4996 | ambiguous | -0.877 | Destabilizing | 0.116 | N | 0.517 | neutral | None | None | None | None | N |
R/C | 0.2145 | likely_benign | 0.2086 | benign | -0.833 | Destabilizing | 0.981 | D | 0.646 | neutral | None | None | None | None | N |
R/D | 0.8484 | likely_pathogenic | 0.8611 | pathogenic | 0.104 | Stabilizing | 0.388 | N | 0.59 | neutral | None | None | None | None | N |
R/E | 0.459 | ambiguous | 0.48 | ambiguous | 0.236 | Stabilizing | 0.116 | N | 0.534 | neutral | None | None | None | None | N |
R/F | 0.6032 | likely_pathogenic | 0.5991 | pathogenic | -0.796 | Destabilizing | 0.932 | D | 0.635 | neutral | None | None | None | None | N |
R/G | 0.4077 | ambiguous | 0.4625 | ambiguous | -1.171 | Destabilizing | 0.324 | N | 0.528 | neutral | N | 0.503695777 | None | None | N |
R/H | 0.152 | likely_benign | 0.1541 | benign | -1.543 | Destabilizing | 0.818 | D | 0.519 | neutral | None | None | None | None | N |
R/I | 0.2994 | likely_benign | 0.3005 | benign | -0.091 | Destabilizing | 0.773 | D | 0.624 | neutral | N | 0.484416582 | None | None | N |
R/K | 0.0725 | likely_benign | 0.0751 | benign | -0.631 | Destabilizing | None | N | 0.155 | neutral | N | 0.332951189 | None | None | N |
R/L | 0.2921 | likely_benign | 0.2851 | benign | -0.091 | Destabilizing | 0.388 | N | 0.528 | neutral | None | None | None | None | N |
R/M | 0.2881 | likely_benign | 0.2948 | benign | -0.459 | Destabilizing | 0.932 | D | 0.59 | neutral | None | None | None | None | N |
R/N | 0.713 | likely_pathogenic | 0.7282 | pathogenic | -0.241 | Destabilizing | 0.388 | N | 0.517 | neutral | None | None | None | None | N |
R/P | 0.9104 | likely_pathogenic | 0.9244 | pathogenic | -0.333 | Destabilizing | 0.818 | D | 0.611 | neutral | None | None | None | None | N |
R/Q | 0.1232 | likely_benign | 0.1263 | benign | -0.369 | Destabilizing | 0.241 | N | 0.543 | neutral | None | None | None | None | N |
R/S | 0.6174 | likely_pathogenic | 0.6547 | pathogenic | -1.057 | Destabilizing | 0.193 | N | 0.507 | neutral | N | 0.503522418 | None | None | N |
R/T | 0.3699 | ambiguous | 0.3923 | ambiguous | -0.733 | Destabilizing | 0.324 | N | 0.523 | neutral | N | 0.503522418 | None | None | N |
R/V | 0.3778 | ambiguous | 0.3748 | ambiguous | -0.333 | Destabilizing | 0.69 | D | 0.606 | neutral | None | None | None | None | N |
R/W | 0.2473 | likely_benign | 0.2493 | benign | -0.496 | Destabilizing | 0.981 | D | 0.665 | neutral | None | None | None | None | N |
R/Y | 0.4927 | ambiguous | 0.4798 | ambiguous | -0.195 | Destabilizing | 0.932 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.