Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29096 | 87511;87512;87513 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
N2AB | 27455 | 82588;82589;82590 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
N2A | 26528 | 79807;79808;79809 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
N2B | 20031 | 60316;60317;60318 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
Novex-1 | 20156 | 60691;60692;60693 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
Novex-2 | 20223 | 60892;60893;60894 | chr2:178558068;178558067;178558066 | chr2:179422795;179422794;179422793 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1575589104 | None | 0.999 | N | 0.436 | 0.29 | 0.352048277211 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85785E-06 | 0 | 0 |
T/I | None | None | 1.0 | D | 0.655 | 0.474 | 0.657668229798 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 5.65163E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.124 | likely_benign | 0.1111 | benign | -0.443 | Destabilizing | 0.999 | D | 0.436 | neutral | N | 0.520418321 | None | None | N |
T/C | 0.5015 | ambiguous | 0.4715 | ambiguous | -0.291 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
T/D | 0.3658 | ambiguous | 0.331 | benign | 0.198 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
T/E | 0.4894 | ambiguous | 0.4369 | ambiguous | 0.135 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/F | 0.3646 | ambiguous | 0.3233 | benign | -0.856 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/G | 0.2016 | likely_benign | 0.1976 | benign | -0.6 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
T/H | 0.3179 | likely_benign | 0.2804 | benign | -0.896 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
T/I | 0.3737 | ambiguous | 0.3247 | benign | -0.144 | Destabilizing | 1.0 | D | 0.655 | neutral | D | 0.52882716 | None | None | N |
T/K | 0.3114 | likely_benign | 0.2719 | benign | -0.418 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
T/L | 0.1538 | likely_benign | 0.1407 | benign | -0.144 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
T/M | 0.1263 | likely_benign | 0.1171 | benign | 0.052 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
T/N | 0.1159 | likely_benign | 0.1146 | benign | -0.23 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.492519643 | None | None | N |
T/P | 0.5013 | ambiguous | 0.411 | ambiguous | -0.214 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.52882716 | None | None | N |
T/Q | 0.3306 | likely_benign | 0.3014 | benign | -0.445 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
T/R | 0.2813 | likely_benign | 0.2374 | benign | -0.153 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
T/S | 0.0892 | likely_benign | 0.0905 | benign | -0.47 | Destabilizing | 0.999 | D | 0.458 | neutral | N | 0.473760524 | None | None | N |
T/V | 0.2735 | likely_benign | 0.2404 | benign | -0.214 | Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
T/W | 0.7215 | likely_pathogenic | 0.6741 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/Y | 0.4358 | ambiguous | 0.3975 | ambiguous | -0.567 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.