Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29098 | 87517;87518;87519 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
N2AB | 27457 | 82594;82595;82596 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
N2A | 26530 | 79813;79814;79815 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
N2B | 20033 | 60322;60323;60324 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
Novex-1 | 20158 | 60697;60698;60699 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
Novex-2 | 20225 | 60898;60899;60900 | chr2:178558062;178558061;178558060 | chr2:179422789;179422788;179422787 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs755499990 | -0.207 | 0.011 | N | 0.178 | 0.054 | 0.187945064343 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/D | rs755499990 | -0.207 | 0.011 | N | 0.178 | 0.054 | 0.187945064343 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02352E-05 |
E/K | rs369063299 | 0.478 | 0.961 | N | 0.578 | 0.378 | None | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/K | rs369063299 | 0.478 | 0.961 | N | 0.578 | 0.378 | None | gnomAD-4.0.0 | 4.10502E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39656E-06 | 0 | 0 |
E/Q | rs369063299 | -0.04 | 0.98 | D | 0.535 | 0.231 | 0.361958692863 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs369063299 | -0.04 | 0.98 | D | 0.535 | 0.231 | 0.361958692863 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs369063299 | -0.04 | 0.98 | D | 0.535 | 0.231 | 0.361958692863 | gnomAD-4.0.0 | 1.23929E-06 | None | None | None | None | N | None | 2.6688E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1691 | likely_benign | 0.1662 | benign | -0.224 | Destabilizing | 0.98 | D | 0.611 | neutral | N | 0.514278995 | None | None | N |
E/C | 0.8458 | likely_pathogenic | 0.8336 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.0957 | likely_benign | 0.0968 | benign | -0.235 | Destabilizing | 0.011 | N | 0.178 | neutral | N | 0.420523472 | None | None | N |
E/F | 0.825 | likely_pathogenic | 0.8105 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/G | 0.1141 | likely_benign | 0.1119 | benign | -0.382 | Destabilizing | 0.961 | D | 0.649 | neutral | N | 0.466237119 | None | None | N |
E/H | 0.4543 | ambiguous | 0.4176 | ambiguous | 0.092 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
E/I | 0.4945 | ambiguous | 0.4774 | ambiguous | 0.146 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/K | 0.1418 | likely_benign | 0.1242 | benign | 0.487 | Stabilizing | 0.961 | D | 0.578 | neutral | N | 0.496039951 | None | None | N |
E/L | 0.5095 | ambiguous | 0.4916 | ambiguous | 0.146 | Stabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/M | 0.5554 | ambiguous | 0.5374 | ambiguous | 0.185 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/N | 0.1789 | likely_benign | 0.1862 | benign | 0.229 | Stabilizing | 0.97 | D | 0.585 | neutral | None | None | None | None | N |
E/P | 0.7734 | likely_pathogenic | 0.7568 | pathogenic | 0.042 | Stabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
E/Q | 0.1396 | likely_benign | 0.1282 | benign | 0.246 | Stabilizing | 0.98 | D | 0.535 | neutral | D | 0.534174265 | None | None | N |
E/R | 0.2608 | likely_benign | 0.2275 | benign | 0.636 | Stabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | N |
E/S | 0.1689 | likely_benign | 0.1697 | benign | 0.081 | Stabilizing | 0.97 | D | 0.571 | neutral | None | None | None | None | N |
E/T | 0.2023 | likely_benign | 0.1999 | benign | 0.211 | Stabilizing | 0.985 | D | 0.603 | neutral | None | None | None | None | N |
E/V | 0.3083 | likely_benign | 0.2898 | benign | 0.042 | Stabilizing | 0.998 | D | 0.656 | neutral | N | 0.486999181 | None | None | N |
E/W | 0.8986 | likely_pathogenic | 0.8797 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/Y | 0.6637 | likely_pathogenic | 0.6428 | pathogenic | None | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.