Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29100 | 87523;87524;87525 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
N2AB | 27459 | 82600;82601;82602 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
N2A | 26532 | 79819;79820;79821 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
N2B | 20035 | 60328;60329;60330 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
Novex-1 | 20160 | 60703;60704;60705 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
Novex-2 | 20227 | 60904;60905;60906 | chr2:178558056;178558055;178558054 | chr2:179422783;179422782;179422781 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1702186822 | None | 0.81 | N | 0.729 | 0.121 | 0.373357554552 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/M | rs1702186822 | None | 0.81 | N | 0.729 | 0.121 | 0.373357554552 | gnomAD-4.0.0 | 6.57108E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5807 | likely_pathogenic | 0.5232 | ambiguous | -2.913 | Highly Destabilizing | 0.25 | N | 0.669 | neutral | None | None | None | None | N |
L/C | 0.5791 | likely_pathogenic | 0.508 | ambiguous | -2.63 | Highly Destabilizing | 0.977 | D | 0.666 | neutral | None | None | None | None | N |
L/D | 0.9943 | likely_pathogenic | 0.9911 | pathogenic | -3.33 | Highly Destabilizing | 0.972 | D | 0.763 | deleterious | None | None | None | None | N |
L/E | 0.9712 | likely_pathogenic | 0.9637 | pathogenic | -3.112 | Highly Destabilizing | 0.92 | D | 0.761 | deleterious | None | None | None | None | N |
L/F | 0.2807 | likely_benign | 0.1833 | benign | -1.881 | Destabilizing | 0.012 | N | 0.539 | neutral | None | None | None | None | N |
L/G | 0.9253 | likely_pathogenic | 0.9036 | pathogenic | -3.471 | Highly Destabilizing | 0.92 | D | 0.771 | deleterious | None | None | None | None | N |
L/H | 0.8905 | likely_pathogenic | 0.8233 | pathogenic | -2.877 | Highly Destabilizing | 0.992 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/I | 0.0859 | likely_benign | 0.0847 | benign | -1.295 | Destabilizing | 0.009 | N | 0.392 | neutral | None | None | None | None | N |
L/K | 0.9631 | likely_pathogenic | 0.9387 | pathogenic | -2.442 | Highly Destabilizing | 0.92 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/M | 0.1239 | likely_benign | 0.1058 | benign | -1.382 | Destabilizing | 0.81 | D | 0.729 | prob.delet. | N | 0.45842206 | None | None | N |
L/N | 0.9581 | likely_pathogenic | 0.9357 | pathogenic | -2.814 | Highly Destabilizing | 0.972 | D | 0.752 | deleterious | None | None | None | None | N |
L/P | 0.9909 | likely_pathogenic | 0.9876 | pathogenic | -1.816 | Destabilizing | 0.963 | D | 0.761 | deleterious | N | 0.477007821 | None | None | N |
L/Q | 0.8888 | likely_pathogenic | 0.8482 | pathogenic | -2.696 | Highly Destabilizing | 0.963 | D | 0.719 | prob.delet. | N | 0.433467687 | None | None | N |
L/R | 0.9335 | likely_pathogenic | 0.8964 | pathogenic | -2.054 | Highly Destabilizing | 0.896 | D | 0.725 | prob.delet. | N | 0.432774254 | None | None | N |
L/S | 0.8567 | likely_pathogenic | 0.8081 | pathogenic | -3.549 | Highly Destabilizing | 0.85 | D | 0.749 | deleterious | None | None | None | None | N |
L/T | 0.5643 | likely_pathogenic | 0.5378 | ambiguous | -3.176 | Highly Destabilizing | 0.617 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/V | 0.0857 | likely_benign | 0.0887 | benign | -1.816 | Destabilizing | 0.002 | N | 0.404 | neutral | N | 0.438102716 | None | None | N |
L/W | 0.7342 | likely_pathogenic | 0.5963 | pathogenic | -2.237 | Highly Destabilizing | 0.992 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/Y | 0.7726 | likely_pathogenic | 0.6345 | pathogenic | -2.004 | Highly Destabilizing | 0.739 | D | 0.732 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.