Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29102 | 87529;87530;87531 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
N2AB | 27461 | 82606;82607;82608 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
N2A | 26534 | 79825;79826;79827 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
N2B | 20037 | 60334;60335;60336 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
Novex-1 | 20162 | 60709;60710;60711 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
Novex-2 | 20229 | 60910;60911;60912 | chr2:178558050;178558049;178558048 | chr2:179422777;179422776;179422775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1396193875 | -1.469 | 0.011 | N | 0.226 | 0.063 | 0.215869574891 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs1396193875 | -1.469 | 0.011 | N | 0.226 | 0.063 | 0.215869574891 | gnomAD-4.0.0 | 1.591E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8966 | likely_pathogenic | 0.871 | pathogenic | -3.061 | Highly Destabilizing | 0.845 | D | 0.704 | prob.neutral | None | None | None | None | N |
I/C | 0.8966 | likely_pathogenic | 0.8743 | pathogenic | -2.753 | Highly Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/D | 0.9982 | likely_pathogenic | 0.9967 | pathogenic | -3.75 | Highly Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | N |
I/E | 0.9955 | likely_pathogenic | 0.9924 | pathogenic | -3.449 | Highly Destabilizing | 0.987 | D | 0.849 | deleterious | None | None | None | None | N |
I/F | 0.3501 | ambiguous | 0.2789 | benign | -1.876 | Destabilizing | 0.967 | D | 0.636 | neutral | N | 0.440316302 | None | None | N |
I/G | 0.9851 | likely_pathogenic | 0.9782 | pathogenic | -3.692 | Highly Destabilizing | 0.987 | D | 0.847 | deleterious | None | None | None | None | N |
I/H | 0.9906 | likely_pathogenic | 0.9838 | pathogenic | -3.268 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
I/K | 0.9924 | likely_pathogenic | 0.9856 | pathogenic | -2.608 | Highly Destabilizing | 0.987 | D | 0.851 | deleterious | None | None | None | None | N |
I/L | 0.1594 | likely_benign | 0.1478 | benign | -1.181 | Destabilizing | 0.426 | N | 0.436 | neutral | N | 0.345660544 | None | None | N |
I/M | 0.2013 | likely_benign | 0.1791 | benign | -1.371 | Destabilizing | 0.983 | D | 0.62 | neutral | N | 0.4918412 | None | None | N |
I/N | 0.9833 | likely_pathogenic | 0.9734 | pathogenic | -3.226 | Highly Destabilizing | 0.994 | D | 0.849 | deleterious | N | 0.456630393 | None | None | N |
I/P | 0.9961 | likely_pathogenic | 0.994 | pathogenic | -1.796 | Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | N |
I/Q | 0.9912 | likely_pathogenic | 0.9843 | pathogenic | -2.942 | Highly Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
I/R | 0.9861 | likely_pathogenic | 0.9744 | pathogenic | -2.432 | Highly Destabilizing | 0.987 | D | 0.855 | deleterious | None | None | None | None | N |
I/S | 0.9742 | likely_pathogenic | 0.9626 | pathogenic | -3.917 | Highly Destabilizing | 0.967 | D | 0.793 | deleterious | N | 0.456630393 | None | None | N |
I/T | 0.9626 | likely_pathogenic | 0.946 | pathogenic | -3.443 | Highly Destabilizing | 0.892 | D | 0.721 | prob.delet. | N | 0.456630393 | None | None | N |
I/V | 0.0838 | likely_benign | 0.0867 | benign | -1.796 | Destabilizing | 0.011 | N | 0.226 | neutral | N | 0.483683077 | None | None | N |
I/W | 0.957 | likely_pathogenic | 0.929 | pathogenic | -2.323 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.8886 | likely_pathogenic | 0.8358 | pathogenic | -2.112 | Highly Destabilizing | 0.987 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.