Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29106 | 87541;87542;87543 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
N2AB | 27465 | 82618;82619;82620 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
N2A | 26538 | 79837;79838;79839 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
N2B | 20041 | 60346;60347;60348 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
Novex-1 | 20166 | 60721;60722;60723 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
Novex-2 | 20233 | 60922;60923;60924 | chr2:178558038;178558037;178558036 | chr2:179422765;179422764;179422763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1559263086 | None | 0.892 | N | 0.541 | 0.307 | 0.29132392195 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4321 | ambiguous | 0.5672 | pathogenic | -0.639 | Destabilizing | 0.892 | D | 0.557 | neutral | N | 0.49920989 | None | None | N |
E/C | 0.961 | likely_pathogenic | 0.9789 | pathogenic | -0.055 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.1203 | likely_benign | 0.1657 | benign | -0.446 | Destabilizing | 0.011 | N | 0.181 | neutral | N | 0.428808442 | None | None | N |
E/F | 0.9406 | likely_pathogenic | 0.9692 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.3456 | ambiguous | 0.4578 | ambiguous | -0.86 | Destabilizing | 0.892 | D | 0.541 | neutral | N | 0.476063671 | None | None | N |
E/H | 0.8386 | likely_pathogenic | 0.904 | pathogenic | -0.5 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
E/I | 0.8436 | likely_pathogenic | 0.9081 | pathogenic | -0.078 | Destabilizing | 0.987 | D | 0.772 | deleterious | None | None | None | None | N |
E/K | 0.607 | likely_pathogenic | 0.7227 | pathogenic | 0.178 | Stabilizing | 0.892 | D | 0.505 | neutral | N | 0.451050583 | None | None | N |
E/L | 0.8241 | likely_pathogenic | 0.9043 | pathogenic | -0.078 | Destabilizing | 0.987 | D | 0.745 | deleterious | None | None | None | None | N |
E/M | 0.8332 | likely_pathogenic | 0.9035 | pathogenic | 0.235 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/N | 0.4169 | ambiguous | 0.5711 | pathogenic | -0.163 | Destabilizing | 0.95 | D | 0.585 | neutral | None | None | None | None | N |
E/P | 0.9539 | likely_pathogenic | 0.9736 | pathogenic | -0.245 | Destabilizing | 0.987 | D | 0.667 | neutral | None | None | None | None | N |
E/Q | 0.429 | ambiguous | 0.5207 | ambiguous | -0.125 | Destabilizing | 0.983 | D | 0.575 | neutral | N | 0.4918412 | None | None | N |
E/R | 0.7443 | likely_pathogenic | 0.8324 | pathogenic | 0.312 | Stabilizing | 0.987 | D | 0.628 | neutral | None | None | None | None | N |
E/S | 0.4732 | ambiguous | 0.6152 | pathogenic | -0.349 | Destabilizing | 0.916 | D | 0.515 | neutral | None | None | None | None | N |
E/T | 0.6369 | likely_pathogenic | 0.7599 | pathogenic | -0.163 | Destabilizing | 0.975 | D | 0.608 | neutral | None | None | None | None | N |
E/V | 0.6555 | likely_pathogenic | 0.7626 | pathogenic | -0.245 | Destabilizing | 0.983 | D | 0.697 | prob.neutral | N | 0.492534633 | None | None | N |
E/W | 0.9773 | likely_pathogenic | 0.9884 | pathogenic | -0.338 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.8204 | likely_pathogenic | 0.8991 | pathogenic | -0.276 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.